Detail information of GWHGAAEX013048/evm.TU.scaffold_49.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|17229954|ref|NP_486502.1|4.00E-10hypothetical protein alr2462 [Nostoc sp. PCC 7120]
KOGKOG42672.00E-52Predicted membrane protein
nrgi|695036325|ref|XP_009405614.1|3.34E-57PREDICTED: UPF0136 membrane protein At2g26240 [Musa acuminata subsp. malaccensis]
Swissprottr|O64847|U136_ARATH2.00E-10UPF0136 membrane protein At2g26240
trEMBLtr|M0T924|M0T924_MUSAM1.00E-57Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P21760_001}
TAIRAT3G205102.00E-52Transmembrane proteins 14C

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000046107655220833+
Transcript Sequence

Network for GWHGAAEX013048

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03647.12Tmemb_1451032.10E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.930
SRR2545915Juvenile tuber44.360
SRP108465SRR5643513five period of Gastrodia elata75.470
SRR5643514five period of Gastrodia elata113.640
SRR5643515five period of Gastrodia elata91.280
SRR5643524five period of Gastrodia elata106.980
SRR5643525five period of Gastrodia elata105.860
SRR5643528five period of Gastrodia elata169.100
SRR5643658five period of Gastrodia elata104.160
SRR5643659five period of Gastrodia elata34.100
SRR5643660five period of Gastrodia elata53.590
SRR5643661five period of Gastrodia elata42.330
SRR5643662five period of Gastrodia elata27.000
SRR5643663five period of Gastrodia elata23.380
SRR5643664five period of Gastrodia elata28.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_186.320
SRR6049655Rhizomagastrodiae_C368-T10_good_1168.400
SRR6049656Rhizomagastrodiae_C368-T07_good_195.850
SRR6049657Rhizomagastrodiae_C368-T07_good_151.690
SRR6049658Rhizomagastrodiae_C368-T04_good_162.970
SRR6049659Rhizomagastrodiae_C368-T04_good_158.590
SRR6049660Rhizomagastrodiae_C368-T01_good_154.730
SRR6049661Rhizomagastrodiae_C368-T04_good_161.410
SRR6049662Rhizomagastrodiae_C368-T01_good_194.700
SRR6049663Rhizomagastrodiae_C368-T01_good_173.980
SRR6049664Rhizomagastrodiae_C368-T10_good_1144.250
SRR6049665Rhizomagastrodiae_C368-T10_good_1144.250
SRP279888GastroGastrodia elata tuber 91.58
JuvenJuvenile tuber32.09
Mother_GastroMother tuber of Gastrodia elata 193.75
Mother_JuvenMother tuber of Juvenile 125.26