Detail information of GWHGAAEX013050/evm.TU.scaffold_49.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743793431|ref|XP_010923928.1|0PREDICTED: microtubule-associated protein TORTIFOLIA1 [Elaeis guineensis]
Swissprottr|Q9T041|MAPT_ARATH0Microtubule-associated protein TORTIFOLIA1
trEMBLtr|M0TZH3|M0TZH3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P11640_001}
TAIRAT4G270600ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000046241974285613-
Transcript Sequence

Network for GWHGAAEX013050

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.300
SRR2545915Juvenile tuber7.630
SRP108465SRR5643513five period of Gastrodia elata7.890
SRR5643514five period of Gastrodia elata4.990
SRR5643515five period of Gastrodia elata5.620
SRR5643524five period of Gastrodia elata5.280
SRR5643525five period of Gastrodia elata6.950
SRR5643528five period of Gastrodia elata5.840
SRR5643658five period of Gastrodia elata7.380
SRR5643659five period of Gastrodia elata8.280
SRR5643660five period of Gastrodia elata9.220
SRR5643661five period of Gastrodia elata7.460
SRR5643662five period of Gastrodia elata8.170
SRR5643663five period of Gastrodia elata7.790
SRR5643664five period of Gastrodia elata8.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.980
SRR6049655Rhizomagastrodiae_C368-T10_good_19.150
SRR6049656Rhizomagastrodiae_C368-T07_good_17.820
SRR6049657Rhizomagastrodiae_C368-T07_good_112.200
SRR6049658Rhizomagastrodiae_C368-T04_good_111.000
SRR6049659Rhizomagastrodiae_C368-T04_good_113.330
SRR6049660Rhizomagastrodiae_C368-T01_good_110.950
SRR6049661Rhizomagastrodiae_C368-T04_good_19.800
SRR6049662Rhizomagastrodiae_C368-T01_good_17.310
SRR6049663Rhizomagastrodiae_C368-T01_good_17.910
SRR6049664Rhizomagastrodiae_C368-T10_good_15.800
SRR6049665Rhizomagastrodiae_C368-T10_good_15.800
SRP279888GastroGastrodia elata tuber 8.01
JuvenJuvenile tuber15.73
Mother_GastroMother tuber of Gastrodia elata 6.39
Mother_JuvenMother tuber of Juvenile 11.79