Detail information of GWHGAAEX013055/evm.TU.scaffold_49.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743793551|ref|XP_010923956.1|4.78E-29PREDICTED: CRIB domain-containing protein RIC10-like isoform X2 [Elaeis guineensis]
Swissprottr|Q9M0Y9|RIC10_ARATH7.00E-18CRIB domain-containing protein RIC10
trEMBLtr|K3YAH5|K3YAH5_SETIT3.00E-27Uncharacterized protein {ECO:0000313|EnsemblPlants:Si011217m}
TAIRAT4G049002.00E-17ROP-interactive CRIB motif-containing protein 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000046933271935238-
Transcript Sequence

Network for GWHGAAEX013055

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00786.27PBD61933.40E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.960
SRR2545915Juvenile tuber9.590
SRP108465SRR5643513five period of Gastrodia elata14.110
SRR5643514five period of Gastrodia elata25.830
SRR5643515five period of Gastrodia elata13.960
SRR5643524five period of Gastrodia elata18.860
SRR5643525five period of Gastrodia elata17.410
SRR5643528five period of Gastrodia elata22.150
SRR5643658five period of Gastrodia elata26.550
SRR5643659five period of Gastrodia elata11.020
SRR5643660five period of Gastrodia elata10.220
SRR5643661five period of Gastrodia elata12.500
SRR5643662five period of Gastrodia elata10.870
SRR5643663five period of Gastrodia elata12.390
SRR5643664five period of Gastrodia elata8.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.330
SRR6049655Rhizomagastrodiae_C368-T10_good_116.450
SRR6049656Rhizomagastrodiae_C368-T07_good_18.690
SRR6049657Rhizomagastrodiae_C368-T07_good_16.670
SRR6049658Rhizomagastrodiae_C368-T04_good_15.730
SRR6049659Rhizomagastrodiae_C368-T04_good_14.070
SRR6049660Rhizomagastrodiae_C368-T01_good_18.460
SRR6049661Rhizomagastrodiae_C368-T04_good_16.150
SRR6049662Rhizomagastrodiae_C368-T01_good_118.790
SRR6049663Rhizomagastrodiae_C368-T01_good_114.700
SRR6049664Rhizomagastrodiae_C368-T10_good_124.530
SRR6049665Rhizomagastrodiae_C368-T10_good_124.530
SRP279888GastroGastrodia elata tuber 11.40
JuvenJuvenile tuber4.66
Mother_GastroMother tuber of Gastrodia elata 12.40
Mother_JuvenMother tuber of Juvenile 2.89