Detail information of GWHGAAEX013059/evm.TU.scaffold_49.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04326.00E-06Valyl-tRNA synthetase
trEMBLtr|U5GC79|U5GC79_POPTR8.00E-06Uncharacterized protein {ECO:0000313|EMBL:ERP61133.1}
TAIRAT5G16710_26.00E-06Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004616185301619393-
Transcript Sequence

Network for GWHGAAEX013059

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01873VARS, valS Aminoacyl-tRNA biosynthesis map00970

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.510
SRR2545915Juvenile tuber3.960
SRP108465SRR5643513five period of Gastrodia elata0.840
SRR5643514five period of Gastrodia elata1.270
SRR5643515five period of Gastrodia elata0.310
SRR5643524five period of Gastrodia elata0.280
SRR5643525five period of Gastrodia elata0.700
SRR5643528five period of Gastrodia elata0.510
SRR5643658five period of Gastrodia elata0.390
SRR5643659five period of Gastrodia elata0.960
SRR5643660five period of Gastrodia elata1.200
SRR5643661five period of Gastrodia elata0.150
SRR5643662five period of Gastrodia elata0.450
SRR5643663five period of Gastrodia elata0.920
SRR5643664five period of Gastrodia elata0.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.680
SRR6049655Rhizomagastrodiae_C368-T10_good_13.350
SRR6049656Rhizomagastrodiae_C368-T07_good_13.380
SRR6049657Rhizomagastrodiae_C368-T07_good_12.450
SRR6049658Rhizomagastrodiae_C368-T04_good_15.550
SRR6049659Rhizomagastrodiae_C368-T04_good_16.340
SRR6049660Rhizomagastrodiae_C368-T01_good_16.080
SRR6049661Rhizomagastrodiae_C368-T04_good_14.980
SRR6049662Rhizomagastrodiae_C368-T01_good_18.490
SRR6049663Rhizomagastrodiae_C368-T01_good_16.510
SRR6049664Rhizomagastrodiae_C368-T10_good_12.600
SRR6049665Rhizomagastrodiae_C368-T10_good_12.600
SRP279888GastroGastrodia elata tuber 4.21
JuvenJuvenile tuber0.38
Mother_GastroMother tuber of Gastrodia elata 1.41
Mother_JuvenMother tuber of Juvenile 0.18