Gene detail

Detail information of GWHGAAEX013060/evm.TU.scaffold_49.29

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|357390407\|ref\|YP_004905247.1\|	2.00E-06	putative glycosyltransferase [Kitasatospora setae KM-6054]
nr	gi\|720077206\|ref\|XP_010240964.1\|	0	PREDICTED: probable galacturonosyltransferase 12 [Nelumbo nucifera]
Swissprot	tr\|Q9FH36\|GAUTC_ARATH	0	Probable galacturonosyltransferase 12
trEMBL	tr\|M5X0L1\|M5X0L1_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ15103.1}
TAIR	AT5G54690	0	galacturonosyltransferase 12

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000046	1933233	1936554	+

Transcript Sequence
>GWHTAAEX013060 TTGAACTTTTTTGAGTGACACATCCCTCTTAGAAATTTATTGTATTAGCGCAAAGGCTAAGCAAAGGTAGGTGTTGGAAAGCACAACCCTAACTAAGCTTTTCTGAAGATCGAGATATCGAACCCCTCCCTTTTTTACCTTCCCCTGTATTCCTCTATCCAAGAACTTCAATTCAGGATTATTGCTCTTGAACAATCCTTCATATTTTCTTCTTTCTTTATTTTTTGCTCTGCTGCAATTCGTTGCATATGCGCTTCAGCTGATCAAGGGCTTTAGAGGCAAAGGAAGAACGAAGGATGCAGCTTCACATTTCACCCAGCCTGAGACATGTGACTGTGCTTCCCGGGAAGGGAGTGAGGGACTTCATCAAAGTTAAGGTGGCTTCGAGAAGGCCCTCTTACAGAATGCTCTTTTATATTCTGCTTTTCATGACTTTCGTGCTTCGGTTCGTCTTCGTGCTGACCGCAATGGACACGATTGATGGCGCAAATCAGTGCTCCTCCTTAGGGTGCTTAGGAAAAAGGCTGGGACCAAAAATATTTGGAAGAAACCCGAATAGAATGGTACCAGAGGAAATATACAGAGTTCTTGAAGAGGAGGAGGTGAGAATTCCACGGTTCGGCTCAGATGCTCCGGAGTCCTTGGAAGACTTCGTCGCAGAAATGAGAAGCAGTAAATCCGACGCTAAAAGCTTTGCTCTGAGGCTCAAGGCCATGGTCCGCCTCCTCGAGCAGAAGACGCGCATCAGCAAAATCCAGGAGATGGTGTACCGCCATGTGGCTTCCAGCAGTGTCCCGAAACCCCTGCACTGCCTCGCCCTCCGCCTGGCCGCAGAGCACTCGAGGAATTCGGCTGCCCGGGCGCCTCTCCCTTCTCCTGAACTCATTCCGGCCCTAACCGACAACTTCCGGCGCCACTTCATCCTCGCCTCCGATAACGTGCTCGCCGCCGGCGTGGCGGTGGAGTCGCTGATACGGAACGCGCATTGGCCTGAGTCCGTTGTTGTGCACGTGATCACGGACCGAAAGACGCACGCGCCCATGCACGCGTGGTTCGCCCTGCATCCGCAGGCGCCTGCGGTGGTCGAGGTGCGGGCGCTGCATCAGTTCGAGTGGTTCGCGAGGAGGCGAGTGCCGGTGCTTGAAGTCATGGAGAGGGATCGGGAGGTGAGGTCGCAGTTTCACCGCGGGCCCGCGGCTGACGAAGAGAGGCCACTAGTTGTCGCGGCCAAGCTGCAGGCCTTGAGTCCCAAGTATAACTCCATCATGAATCACGTACGGATTTACTTGCCGGAGATGTTCCCCAGCCTCAAGAAAGTGGTATTTCTGGATGATGATATCATCGTTCAAGCAGACCTTTCCCCTCTATGGGAAATCGATCTCCATGGAAAAGTTAACGGTGCTGTCGAGACTTGCAGAGGTCATGACAAGTTTGTCATGTCGAAGAGGCTTAAGAATTATCTTAATTTCTCCCACCCATTAATCTCTAAATCCTTCAATTCCGAAGAATGTGCTTGGGCTTATGGCATGAACATATTTGATCTCGATGCATGGCGGAAAACAAGCATCAAAGACACTTACCATGAATGGATTGAAAAGAATTTAGAATCACGGTTGAGCTTGTGGCAATTGGGGACTTTGCCTCCAGGGCTTATAGCATTTCATGGTCATGTTCATGTGATAGATTCATATTGGCACATGTTGGGCTTGGGCTATCAGGAGAATACAACTAGAGAAGAAGCCGAGAGAGCTGCGGTCATACATTTTAATGGCAGGGCCAAGCCATGGCTGGATATTGCATTTCCTCAACTTCGGCCTCTCTGGACAAAGTATATTAATCATTCTGATAAATCTATTAAAGCTTGTAATATAAGGCCTTAGTTTAGGCAAATGTCAACTAAATTGTTTTGGATATGCTTGCCACACAGGGGGGTAGATTGTAGGGAAGAATCATAGTATCACACTACAAGTTGTTTTTGATGATCGATTGTAACTAGGCAAAATTGAACTGTTTCTTCAACGATCATAAGGGTAGATGATGTTTGGGTACTCTGTTAATCCCTTTTGTCATTTTCCCTCAAAATTTATTAAATTTAGATATTTTACTTTATAACAAGTCATTTTACAAAAAAAGTCAATATAAATTTTGTAAATAGTAGAATAATAAAGCATTCGAAACTTAAGCAATGACACTGCCCATGATGCTCTAGAAAAACATTGT

Network for GWHGAAEX013060

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01501.19	Glyco_transf_8	197	501	8.50E-83

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT8

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016757	Molecular Function	transferase activity, transferring glycosyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.040
SRP108465	SRR5643513	five period of Gastrodia elata	0.070
	SRR5643514	five period of Gastrodia elata	0.160
	SRR5643515	five period of Gastrodia elata	0.230
	SRR5643524	five period of Gastrodia elata	0.550
	SRR5643525	five period of Gastrodia elata	67.710
	SRR5643528	five period of Gastrodia elata	50.610
	SRR5643658	five period of Gastrodia elata	160.430
	SRR5643659	five period of Gastrodia elata	0.110
	SRR5643660	five period of Gastrodia elata	0.090
	SRR5643661	five period of Gastrodia elata	0.190
	SRR5643662	five period of Gastrodia elata	0.750
	SRR5643663	five period of Gastrodia elata	0.310
	SRR5643664	five period of Gastrodia elata	0.290
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.440
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.370
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.360
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.140
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.330
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.370
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.460
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.110
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.460
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.460
SRP279888	Gastro	Gastrodia elata tuber	5.10
	Juven	Juvenile tuber	0.04
	Mother_Gastro	Mother tuber of Gastrodia elata	15.17
	Mother_Juven	Mother tuber of Juvenile	1.18