Detail information of GWHGAAEX013069/evm.TU.scaffold_49.41
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG3488 | 1.00E-32 | Dolichol phosphate-mannose regulatory protein (DPM2) |
| nr | gi|672191738|ref|XP_008775582.1| | 1.97E-36 | PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Phoenix dactylifera] |
| trEMBL | tr|W1NF83|W1NF83_AMBTC | 3.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:ERM94141.1} |
| TAIR | AT1G74340 | 1.00E-32 | dolichol phosphate-mannose biosynthesis regulatory protein-related |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000046 | 2730415 | 2730748 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013069
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07297.11 | DPM2 | 4 | 78 | 5.50E-32 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09658 | DPM2 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 | ||
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0019348 | Biological Process | dolichol metabolic process |
| GO:0030234 | Molecular Function | enzyme regulator activity |
| GO:0030176 | Cellular Component | integral component of endoplasmic reticulum membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 21.880 |
| SRR2545915 | Juvenile tuber | 24.920 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.900 |
| SRR5643514 | five period of Gastrodia elata | 4.090 | |
| SRR5643515 | five period of Gastrodia elata | 12.810 | |
| SRR5643524 | five period of Gastrodia elata | 21.380 | |
| SRR5643525 | five period of Gastrodia elata | 16.120 | |
| SRR5643528 | five period of Gastrodia elata | 48.370 | |
| SRR5643658 | five period of Gastrodia elata | 36.160 | |
| SRR5643659 | five period of Gastrodia elata | 19.240 | |
| SRR5643660 | five period of Gastrodia elata | 26.010 | |
| SRR5643661 | five period of Gastrodia elata | 24.360 | |
| SRR5643662 | five period of Gastrodia elata | 24.730 | |
| SRR5643663 | five period of Gastrodia elata | 20.410 | |
| SRR5643664 | five period of Gastrodia elata | 18.120 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 19.930 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 13.440 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 28.830 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.170 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 20.410 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 55.180 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.800 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 24.040 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 27.280 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 40.070 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.170 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.170 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.14 |
| Juven | Juvenile tuber | 3.64 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 73.97 | |
| Mother_Juven | Mother tuber of Juvenile | 13.46 |