Detail information of GWHGAAEX013075/evm.TU.scaffold_49.55
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|71907234|ref|YP_284821.1| | 1.00E-23 | protein kinase:GAF [Dechloromonas aromatica RCB] |
| nr | gi|743759297|ref|XP_010931353.1| | 3.15E-171 | PREDICTED: putative receptor-like protein kinase At4g00960 [Elaeis guineensis] |
| Swissprot | tr|Q8GYA4|CRK10_ARATH | 1.00E-148 | Cysteine-rich receptor-like protein kinase 10 (Precursor) |
| trEMBL | tr|C5Z094|C5Z094_SORBI | 5.00E-168 | Putative uncharacterized protein Sb09g024140 {ECO:0000313|EMBL:EES18427.1} |
| TAIR | AT4G23180 | 2.00E-145 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000046 | 3921114 | 3952263 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013075
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01657.16 | Stress-antifung | 30 | 124 | 2.50E-15 |
| PF01657.16 | Stress-antifung | 147 | 244 | 7.00E-06 |
| PF07714.16 | Pkinase_Tyr | 335 | 602 | 2.00E-45 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_DLSV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.690 |
| SRR2545915 | Juvenile tuber | 14.980 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.810 |
| SRR5643514 | five period of Gastrodia elata | 5.950 | |
| SRR5643515 | five period of Gastrodia elata | 8.520 | |
| SRR5643524 | five period of Gastrodia elata | 7.690 | |
| SRR5643525 | five period of Gastrodia elata | 10.890 | |
| SRR5643528 | five period of Gastrodia elata | 15.080 | |
| SRR5643658 | five period of Gastrodia elata | 10.000 | |
| SRR5643659 | five period of Gastrodia elata | 7.720 | |
| SRR5643660 | five period of Gastrodia elata | 7.440 | |
| SRR5643661 | five period of Gastrodia elata | 8.440 | |
| SRR5643662 | five period of Gastrodia elata | 8.970 | |
| SRR5643663 | five period of Gastrodia elata | 8.410 | |
| SRR5643664 | five period of Gastrodia elata | 8.590 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.260 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 5.580 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.790 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.340 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.770 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.830 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.100 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.120 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.190 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.190 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 7.11 |
| Juven | Juvenile tuber | 6.86 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.94 | |
| Mother_Juven | Mother tuber of Juvenile | 18.89 |