Gene detail

Detail information of GWHGAAEX013085/evm.TU.scaffold_49.73

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|284030326\|ref\|YP_003380257.1\|	5.00E-92	protease-associated PA domain-containing protein [Kribbella flavida DSM 17836]
nr	gi\|743762211\|ref\|XP_010907007.1\|	0	PREDICTED: subtilisin-like protease [Elaeis guineensis]
Swissprot	tr\|O65351\|SUBL_ARATH	5.00E-93	Subtilisin-like protease (Precursor)
trEMBL	tr\|M0T457\|M0T457_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P04590_001}
TAIR	AT4G20430	0	Subtilase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000046	5525428	5552876	-

Transcript Sequence
>GWHTAAEX013085 CTCCTAAAAATTCCCGTTTCCCCGATCCTTTTCCGTTTTTGTTCTTGTTTGCATTCTTGAACACTCAAGTTTCTCCGTTTCTCTCTCCACCTTTCTTTACCTTTCTCTTTTTACTTTTAGCTGCCTTATTAGCTGCTAAGCGCATCTCAGAGTTTCAGAAATCTCTCTATCGCAAGACAGCTCTAAAAAATTTAACACAGAAGAGCAATTTTCAGCTGCCACAGCCACATTTAACTCACCGACATTCCGTAAATGAGTGTCAATCCGTTATGGTTTTTTTCCTAATGCTGGCCTTGTAGATGGTTCTGCTCGCCGCGTTTATTAATTCGGCATCTTCACTGCTGAATAGGGTGTTTGCTTTTTGTCACGATCGCTCTTGGGGGTTGAATGGTGTCCGAACTGGAAGTTAGTGGGGTATAAGATGGGAAGGGCATATTGGATGCTCCTGCTGTTGCTCACGTTGCTGGGGTTTGTGATCAGAGGAGGATTTTGCCAAAATGATGCGGCTGTTTACATTGTTACGTTGAAGCAGGCCCCTGCTGTTCATTACTTTAATGAGATTGCCGAGAGGAATAGCCATGGAAGTTTTGGGAGGCTAGATACAGGGAAACCGAGAAATGGTTCACGTACTAGTGGAGATTACAGCTCATTTGTAATCAGATTTCAAAATTCACTTTTGAAAAAAGTACTAAGAGGGGAGCGCTATCTTAAACTGTATAGCTTTCATTACTTGATCAATGGTTTTGTTATTCTTATCACTCCTCAACAGGCAGATAAACTTTCCAATAGAAGAGAAATAGCCAATGTTGAATTGGATTTCTCTGTCAGGACAGCGACAACATACACTCCTGAATTTTTGGGCCTGCCCCAAGGAGCTTGGATTCAAGATGGAGGTCCGGAATTTGCAGGAAAGGGAATTGTCATTGGTTTTATTGACACAGGAATTGATCCATCACACCCAAGTTTCTCAGATGCTCTCTCAGGCACTGCTTATCCTGTTCCTGCCCACTATTCTGGAGTTTGTGAAGTCACAATCGATTTTCCATCTGGCTCCTGCAATAGAAAACTTGTTGGAGCTCGTCATTTTGCAGCATCTGCCATAACTAGGGGTATTTTTAATGCTTCTCAAGATCACGCTTCACCATTTGATGGAGATGGCCATGGAACGCATACAGCCTCCATTGCCGCTGGTAACCATGGAGTTCCTGTGAATGTGTCAGAGCATCATTTTGGAAATGCAAGTGGAATGGCTCCTCATGCCCATATAGCTGTTTATAAGGCCCTGTATAAACGCTTTGGAGGTTTTGCCGCTGATGTTGTTGCTGCCATAGAACAGGCAGCTCAAGATGGCGTTGATATCATAAGTTTATCCATTACTCCTAATAAGCTTCCTCCTGGCTTGGCTACTTTCTTCAATCCTTTAGATATGGCTTTACTTTCAGCTGTAAAAGCAGGAATATTTGTTGTGCAAGCTGCAGGCAATACTGGTCCTTCACCTAAGAGCATGTCTTCCTTTAGTCCGTGGATTTTCAGTGTGGGTGCTTCAGCTCATGATAGATCTTATAGTAACTTTATCATTCTAGGCAATAATGTTACCATCTCTGGTATTGGACTTGCACCTGGAACAGATGGTGAATCGATGTACACCCTAATATCTGCTACTCATGCCTTGAGAAATGATACAGAAAGAGATCATAAATTTTACCTGGGAGAATGCCAAGATCCTAATCATCTGAACCAAGATCTGATCAAGGGAAACATCATAATTTGTAGCTACTCAATTAGATACGTGCTTGGCCTTTCATCGGTTAAACAAGCTCTTCTAGCTGCTAAGAATGTCAGTGCTGCTGGTATTATATTCTACTTGGATCCTTTTGTCTTAGGGTTTCAGCTTAACCCTACTCCCATGGATATGCCAGGTCTAATAATACCATCTCCCGAAGATTCCCAGGCGATCCTGGAATACTACAACACGTCCTTGGTGAGGGATTCAGGTTCCAACGCCATAATAAAATTTGGTGGGGTTGCGAGAATACTGGGCGGTCTGGACGCCAAGTACAGGAACTCTTCGGCTCCAAAGGTGATGTATTATTCCGCAAGAGGGCCGGACCCAGCTGACAACTCCCCAGCAAACGCAGACATACTGAAGCCCAATGTTATAGCCCCCGGCAACTTCATTTGGGGCGCTTGGAGCTCTCTCGCCACCGACTCCGTGGAATTCCAAGGCGATAAATTCGCAATGATCTCTGGAACAAGCATGGCCGCTCCCCATGTGGCGGGTCTGGCCGCGCTGGTAAAGCAGAAATTCCCGAGTTTCAGCCCGGCGGCCATTGCCTCGGCATTGTCCACAACTGCTGCTGTCCAGAACAAGCAGGGAGGGCCGATCATGGCTCAGCGCGCCTACAGCAACCCGGACTCGTCCCTGTCGCCTGCGACTCCGTTCGACATGGGCAGCGGCTTCGCCAACGCGACGGCTGCATTAGATCCAGGGCTCATCTTCGACGCAGACTATGACGACTACATCTCTTTTCTCTGCGGCATCGGCGACTCCTCCGCTCCGCTGGTTCTTAACCGCACCGGCATCAGCTGCGGCTCTTCCGGCATCAGCGGCAGCGACTTGAACCTGCCTTCCATAACCATCGCGCTGCTGAATCGGTCGAGGACGGTCACGAGAGAGCTCACCAACGTGGCTGCCGACGAGACCTACAGCGTCGCCTTCAGCGCTCCCTATGCGGTTTCTGTTTCGGTGGAACCCGCCCGCTTTTCCATAGCCAAGGGGAGGACTCAGCTTGTCCGCTTTGCGCTCACTGCAACCGCCAACAACTGCTCCGCCAGCTTTGGGAGCGTTCGGATTTACGGCAGCGGCGGCCACGTACTGATCATTCCGCTCTCCGTTATCGTCAAGCTCGCTGCCCCACCACCATAGCCACCGTTCTTTTGCCCTCTCCGGTATTTTTATTTCTTTGAGAACCTCCTGCATTA

Network for GWHGAAEX013085

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05922.15	Inhibitor_I9	30	138	1.00E-18
PF00082.21	Peptidase_S8	163	648	1.20E-43

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.530
SRP064423	SRR2545915	Juvenile tuber	8.870
SRP108465	SRR5643513	five period of Gastrodia elata	6.650
	SRR5643514	five period of Gastrodia elata	9.890
	SRR5643515	five period of Gastrodia elata	7.860
	SRR5643524	five period of Gastrodia elata	9.270
	SRR5643525	five period of Gastrodia elata	4.270
	SRR5643528	five period of Gastrodia elata	4.400
	SRR5643658	five period of Gastrodia elata	4.210
	SRR5643659	five period of Gastrodia elata	12.580
	SRR5643660	five period of Gastrodia elata	9.850
	SRR5643661	five period of Gastrodia elata	9.520
	SRR5643662	five period of Gastrodia elata	7.860
	SRR5643663	five period of Gastrodia elata	9.030
	SRR5643664	five period of Gastrodia elata	7.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.940
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.680
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.380
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.440
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.540
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.570
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.470
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.720
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.720
SRP279888	Gastro	Gastrodia elata tuber	8.56
	Juven	Juvenile tuber	6.25
	Mother_Gastro	Mother tuber of Gastrodia elata	3.27
	Mother_Juven	Mother tuber of Juvenile	4.39