Detail information of GWHGAAEX013087/evm.TU.scaffold_49.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743870365|ref|XP_010906025.1|1.34E-115PREDICTED: protein IQ-DOMAIN 1-like [Elaeis guineensis]
Swissprottr|Q9SF32|IQD1_ARATH1.00E-39Protein IQ-DOMAIN 1
trEMBLtr|K7LVU4|K7LVU4_SOYBN3.00E-113Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G31610.5}
TAIRAT3G221902.00E-87IQ-domain 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004656407835680806-
Transcript Sequence

Network for GWHGAAEX013087

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00612.26IQ891096.90E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.290
SRR2545915Juvenile tuber36.130
SRP108465SRR5643513five period of Gastrodia elata31.660
SRR5643514five period of Gastrodia elata22.730
SRR5643515five period of Gastrodia elata36.630
SRR5643524five period of Gastrodia elata25.940
SRR5643525five period of Gastrodia elata38.750
SRR5643528five period of Gastrodia elata37.640
SRR5643658five period of Gastrodia elata48.580
SRR5643659five period of Gastrodia elata18.860
SRR5643660five period of Gastrodia elata17.690
SRR5643661five period of Gastrodia elata20.860
SRR5643662five period of Gastrodia elata18.260
SRR5643663five period of Gastrodia elata17.970
SRR5643664five period of Gastrodia elata13.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.630
SRR6049655Rhizomagastrodiae_C368-T10_good_120.060
SRR6049656Rhizomagastrodiae_C368-T07_good_123.480
SRR6049657Rhizomagastrodiae_C368-T07_good_125.060
SRR6049658Rhizomagastrodiae_C368-T04_good_126.230
SRR6049659Rhizomagastrodiae_C368-T04_good_127.680
SRR6049660Rhizomagastrodiae_C368-T01_good_130.550
SRR6049661Rhizomagastrodiae_C368-T04_good_122.700
SRR6049662Rhizomagastrodiae_C368-T01_good_130.890
SRR6049663Rhizomagastrodiae_C368-T01_good_131.380
SRR6049664Rhizomagastrodiae_C368-T10_good_122.450
SRR6049665Rhizomagastrodiae_C368-T10_good_122.450
SRP279888GastroGastrodia elata tuber 10.43
JuvenJuvenile tuber22.06
Mother_GastroMother tuber of Gastrodia elata 31.21
Mother_JuvenMother tuber of Juvenile 26.04