Detail information of GWHGAAEX013102/evm.TU.scaffold_5.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218779469|ref|YP_002430787.1|4.00E-23peptidase S10 serine carboxypeptidase [Desulfatibacillum alkenivorans AK-01]
KOGKOG12822.00E-119Serine carboxypeptidases (lysosomal cathepsin A)
nrgi|743847092|ref|XP_010939013.1|7.35E-160PREDICTED: serine carboxypeptidase-like 18 isoform X2 [Elaeis guineensis]
Swissprottr|Q9C7Z9|SCP18_ARATH7.00E-127Serine carboxypeptidase-like 18 (Precursor)
trEMBLtr|M0SK50|M0SK50_MUSAM2.00E-153Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P01330_001}
TAIRAT1G732802.00E-119serine carboxypeptidase-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000016362657396176+
Transcript Sequence

Network for GWHGAAEX013102

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00450.21Peptidase_S10324605.80E-104
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004185Molecular Functionserine-type carboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.780
SRR2545915Juvenile tuber6.550
SRP108465SRR5643513five period of Gastrodia elata10.690
SRR5643514five period of Gastrodia elata11.900
SRR5643515five period of Gastrodia elata9.230
SRR5643524five period of Gastrodia elata11.630
SRR5643525five period of Gastrodia elata16.280
SRR5643528five period of Gastrodia elata14.000
SRR5643658five period of Gastrodia elata15.210
SRR5643659five period of Gastrodia elata8.010
SRR5643660five period of Gastrodia elata5.660
SRR5643661five period of Gastrodia elata7.680
SRR5643662five period of Gastrodia elata6.740
SRR5643663five period of Gastrodia elata11.800
SRR5643664five period of Gastrodia elata6.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.080
SRR6049655Rhizomagastrodiae_C368-T10_good_119.970
SRR6049656Rhizomagastrodiae_C368-T07_good_119.320
SRR6049657Rhizomagastrodiae_C368-T07_good_117.080
SRR6049658Rhizomagastrodiae_C368-T04_good_124.700
SRR6049659Rhizomagastrodiae_C368-T04_good_124.230
SRR6049660Rhizomagastrodiae_C368-T01_good_122.480
SRR6049661Rhizomagastrodiae_C368-T04_good_127.120
SRR6049662Rhizomagastrodiae_C368-T01_good_129.970
SRR6049663Rhizomagastrodiae_C368-T01_good_127.580
SRR6049664Rhizomagastrodiae_C368-T10_good_119.570
SRR6049665Rhizomagastrodiae_C368-T10_good_119.570
SRP279888GastroGastrodia elata tuber 20.43
JuvenJuvenile tuber6.45
Mother_GastroMother tuber of Gastrodia elata 13.11
Mother_JuvenMother tuber of Juvenile 10.35