Detail information of GWHGAAEX013106/evm.TU.scaffold_5.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34551.00E-55Predicted membrane protein
nrgi|672158299|ref|XP_008798884.1|9.13E-73PREDICTED: ergosterol biosynthetic protein 28 [Phoenix dactylifera]
Swissprottr|O80594|ERG28_ARATH2.00E-66Ergosterol biosynthetic protein 28
trEMBLtr|M0TBF7|M0TBF7_MUSAM5.00E-72Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P30120_001}
TAIRAT1G100301.00E-55homolog of yeast ergosterol28

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000016445684470909+
Transcript Sequence

Network for GWHGAAEX013106

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03694.12Erg281172151.90E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.370
SRR2545915Juvenile tuber8.400
SRP108465SRR5643513five period of Gastrodia elata11.250
SRR5643514five period of Gastrodia elata15.940
SRR5643515five period of Gastrodia elata11.990
SRR5643524five period of Gastrodia elata13.450
SRR5643525five period of Gastrodia elata24.310
SRR5643528five period of Gastrodia elata16.200
SRR5643658five period of Gastrodia elata28.550
SRR5643659five period of Gastrodia elata21.440
SRR5643660five period of Gastrodia elata13.070
SRR5643661five period of Gastrodia elata12.940
SRR5643662five period of Gastrodia elata17.290
SRR5643663five period of Gastrodia elata20.770
SRR5643664five period of Gastrodia elata15.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.640
SRR6049655Rhizomagastrodiae_C368-T10_good_126.770
SRR6049656Rhizomagastrodiae_C368-T07_good_112.670
SRR6049657Rhizomagastrodiae_C368-T07_good_18.130
SRR6049658Rhizomagastrodiae_C368-T04_good_16.510
SRR6049659Rhizomagastrodiae_C368-T04_good_18.930
SRR6049660Rhizomagastrodiae_C368-T01_good_110.290
SRR6049661Rhizomagastrodiae_C368-T04_good_19.640
SRR6049662Rhizomagastrodiae_C368-T01_good_114.990
SRR6049663Rhizomagastrodiae_C368-T01_good_110.390
SRR6049664Rhizomagastrodiae_C368-T10_good_114.660
SRR6049665Rhizomagastrodiae_C368-T10_good_114.660
SRP279888GastroGastrodia elata tuber 19.59
JuvenJuvenile tuber13.89
Mother_GastroMother tuber of Gastrodia elata 27.76
Mother_JuvenMother tuber of Juvenile 13.70