Detail information of GWHGAAEX013119/evm.TU.scaffold_5.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|225467412|ref|XP_002271337.1|1.69E-15PREDICTED: phytosulfokines 3 [Vitis vinifera]
Swissprottr|Q9M2Y0|PSK3_ARATH2.00E-13Phytosulfokine-beta (Precursor)
trEMBLtr|D7U6X7|D7U6X7_VITVI6.00E-16Putative uncharacterized protein {ECO:0000313|EMBL:CBI38497.3}
TAIRAT3G497803.00E-12phytosulfokine 4 precursor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000016723833753690-
Transcript Sequence

Network for GWHGAAEX013119

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06404.11PSK34731.80E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008283Biological Processcell proliferation
GO:0008083Molecular Functiongrowth factor activity
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.120
SRR2545915Juvenile tuber6.180
SRP108465SRR5643513five period of Gastrodia elata3.700
SRR5643514five period of Gastrodia elata6.230
SRR5643515five period of Gastrodia elata4.780
SRR5643524five period of Gastrodia elata5.860
SRR5643525five period of Gastrodia elata6.580
SRR5643528five period of Gastrodia elata8.370
SRR5643658five period of Gastrodia elata10.420
SRR5643659five period of Gastrodia elata1.990
SRR5643660five period of Gastrodia elata0.920
SRR5643661five period of Gastrodia elata2.040
SRR5643662five period of Gastrodia elata1.300
SRR5643663five period of Gastrodia elata3.350
SRR5643664five period of Gastrodia elata1.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.910
SRR6049655Rhizomagastrodiae_C368-T10_good_138.120
SRR6049656Rhizomagastrodiae_C368-T07_good_13.440
SRR6049657Rhizomagastrodiae_C368-T07_good_12.950
SRR6049658Rhizomagastrodiae_C368-T04_good_13.290
SRR6049659Rhizomagastrodiae_C368-T04_good_12.050
SRR6049660Rhizomagastrodiae_C368-T01_good_13.570
SRR6049661Rhizomagastrodiae_C368-T04_good_16.260
SRR6049662Rhizomagastrodiae_C368-T01_good_13.300
SRR6049663Rhizomagastrodiae_C368-T01_good_12.010
SRR6049664Rhizomagastrodiae_C368-T10_good_15.840
SRR6049665Rhizomagastrodiae_C368-T10_good_15.840
SRP279888GastroGastrodia elata tuber 2.15
JuvenJuvenile tuber2.35
Mother_GastroMother tuber of Gastrodia elata 17.19
Mother_JuvenMother tuber of Juvenile 6.86