Detail information of GWHGAAEX013125/evm.TU.scaffold_5.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427714337|ref|YP_007062961.1|5.00E-20LPS:glycosyltransferase [Synechococcus sp. PCC 6312]
nrgi|672146127|ref|XP_008796999.1|2.63E-171PREDICTED: probable galacturonosyltransferase-like 1 [Phoenix dactylifera]
Swissprottr|Q9S7G2|GATL2_ARATH2.00E-152Probable galacturonosyltransferase-like 2
trEMBLtr|A0A059DCW6|A0A059DCW6_EUCGR7.00E-166Uncharacterized protein {ECO:0000313|EMBL:KCW88065.1}
TAIRAT3G507608.00E-152galacturonosyltransferase-like 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000016789999791512+
Transcript Sequence

Network for GWHGAAEX013125

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01501.19Glyco_transf_8713303.40E-48
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8
Carbohydrate-Active enzymes FamilyGT8

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016757Molecular Functiontransferase activity, transferring glycosyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.830
SRR2545915Juvenile tuber16.710
SRP108465SRR5643513five period of Gastrodia elata68.790
SRR5643514five period of Gastrodia elata41.070
SRR5643515five period of Gastrodia elata253.490
SRR5643524five period of Gastrodia elata46.070
SRR5643525five period of Gastrodia elata252.390
SRR5643528five period of Gastrodia elata127.370
SRR5643658five period of Gastrodia elata181.960
SRR5643659five period of Gastrodia elata152.780
SRR5643660five period of Gastrodia elata31.810
SRR5643661five period of Gastrodia elata89.720
SRR5643662five period of Gastrodia elata216.040
SRR5643663five period of Gastrodia elata110.080
SRR5643664five period of Gastrodia elata282.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1105.270
SRR6049655Rhizomagastrodiae_C368-T10_good_1137.430
SRR6049656Rhizomagastrodiae_C368-T07_good_166.800
SRR6049657Rhizomagastrodiae_C368-T07_good_167.360
SRR6049658Rhizomagastrodiae_C368-T04_good_172.140
SRR6049659Rhizomagastrodiae_C368-T04_good_175.560
SRR6049660Rhizomagastrodiae_C368-T01_good_1104.390
SRR6049661Rhizomagastrodiae_C368-T04_good_1100.200
SRR6049662Rhizomagastrodiae_C368-T01_good_157.980
SRR6049663Rhizomagastrodiae_C368-T01_good_190.130
SRR6049664Rhizomagastrodiae_C368-T10_good_196.500
SRR6049665Rhizomagastrodiae_C368-T10_good_196.500
SRP279888GastroGastrodia elata tuber 39.45
JuvenJuvenile tuber2.77
Mother_GastroMother tuber of Gastrodia elata 315.98
Mother_JuvenMother tuber of Juvenile 89.12