Detail information of GWHGAAEX013126/evm.TU.scaffold_5.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|433606736|ref|YP_007039105.1|4.00E-11hypothetical protein BN6_49630 [Saccharothrix espanaensis DSM 44229]
KOGKOG17030Adaptor protein Enigma and related PDZ-LIM proteins
nrgi|695037764|ref|XP_009406379.1|0PREDICTED: protein DA1-related 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q8W4F0|DAR1_ARATH0Protein DA1-related 1
trEMBLtr|M0TAW6|M0TAW6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P28210_001}
TAIRAT1G192700DA1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000016795072825515-
Transcript Sequence

Network for GWHGAAEX013126

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00412.21LIM1211753.20E-09
PF12315.7DA1-like2704782.90E-100
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.650
SRR2545915Juvenile tuber35.340
SRP108465SRR5643513five period of Gastrodia elata38.230
SRR5643514five period of Gastrodia elata39.140
SRR5643515five period of Gastrodia elata36.080
SRR5643524five period of Gastrodia elata42.550
SRR5643525five period of Gastrodia elata100.980
SRR5643528five period of Gastrodia elata124.220
SRR5643658five period of Gastrodia elata133.540
SRR5643659five period of Gastrodia elata22.340
SRR5643660five period of Gastrodia elata24.830
SRR5643661five period of Gastrodia elata26.010
SRR5643662five period of Gastrodia elata28.970
SRR5643663five period of Gastrodia elata27.060
SRR5643664five period of Gastrodia elata22.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.340
SRR6049655Rhizomagastrodiae_C368-T10_good_134.060
SRR6049656Rhizomagastrodiae_C368-T07_good_129.250
SRR6049657Rhizomagastrodiae_C368-T07_good_125.290
SRR6049658Rhizomagastrodiae_C368-T04_good_132.470
SRR6049659Rhizomagastrodiae_C368-T04_good_137.220
SRR6049660Rhizomagastrodiae_C368-T01_good_131.780
SRR6049661Rhizomagastrodiae_C368-T04_good_130.750
SRR6049662Rhizomagastrodiae_C368-T01_good_135.090
SRR6049663Rhizomagastrodiae_C368-T01_good_135.760
SRR6049664Rhizomagastrodiae_C368-T10_good_136.530
SRR6049665Rhizomagastrodiae_C368-T10_good_136.530
SRP279888GastroGastrodia elata tuber 30.43
JuvenJuvenile tuber30.50
Mother_GastroMother tuber of Gastrodia elata 70.88
Mother_JuvenMother tuber of Juvenile 48.04