Detail information of GWHGAAEX013132/evm.TU.scaffold_5.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|336122173|ref|YP_004576948.1|3.00E-5750S ribosomal protein L15e [Methanothermococcus okinawensis IH1]
KOGKOG16781.00E-12360s ribosomal protein L15
nrgi|743827617|ref|XP_010933636.1|3.85E-143PREDICTED: 60S ribosomal protein L15-1 [Elaeis guineensis]
Swissprottr|O82528|RL15_PETHY8.00E-13560S ribosomal protein L15
trEMBLtr|B3TM29|B3TM29_ELAGV1.00E-141Ribosomal protein L15 {ECO:0000256|RuleBase:RU000663}
TAIRAT4G167201.00E-123Ribosomal protein L23/L15e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000016906210913604+
Transcript Sequence

Network for GWHGAAEX013132

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00827.16Ribosomal_L15e292171.80E-95
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02877RP-L15e, RPL15 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms66.420
SRR2545915Juvenile tuber78.860
SRP108465SRR5643513five period of Gastrodia elata201.400
SRR5643514five period of Gastrodia elata216.370
SRR5643515five period of Gastrodia elata190.390
SRR5643524five period of Gastrodia elata208.180
SRR5643525five period of Gastrodia elata133.730
SRR5643528five period of Gastrodia elata138.680
SRR5643658five period of Gastrodia elata122.660
SRR5643659five period of Gastrodia elata213.250
SRR5643660five period of Gastrodia elata218.240
SRR5643661five period of Gastrodia elata247.690
SRR5643662five period of Gastrodia elata197.250
SRR5643663five period of Gastrodia elata184.910
SRR5643664five period of Gastrodia elata189.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1186.830
SRR6049655Rhizomagastrodiae_C368-T10_good_1219.860
SRR6049656Rhizomagastrodiae_C368-T07_good_1221.310
SRR6049657Rhizomagastrodiae_C368-T07_good_1178.820
SRR6049658Rhizomagastrodiae_C368-T04_good_1171.000
SRR6049659Rhizomagastrodiae_C368-T04_good_1150.170
SRR6049660Rhizomagastrodiae_C368-T01_good_1190.940
SRR6049661Rhizomagastrodiae_C368-T04_good_1183.110
SRR6049662Rhizomagastrodiae_C368-T01_good_1263.120
SRR6049663Rhizomagastrodiae_C368-T01_good_1218.640
SRR6049664Rhizomagastrodiae_C368-T10_good_1283.700
SRR6049665Rhizomagastrodiae_C368-T10_good_1283.700
SRP279888GastroGastrodia elata tuber 250.47
JuvenJuvenile tuber260.85
Mother_GastroMother tuber of Gastrodia elata 121.22
Mother_JuvenMother tuber of Juvenile 161.13