Detail information of GWHGAAEX013140/evm.TU.scaffold_5.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672137865|ref|XP_008792669.1|9.62E-142PREDICTED: uncharacterized protein LOC103709216 [Phoenix dactylifera]
trEMBLtr|Q1EPF0|Q1EPF0_MUSAC3.00E-131Putative uncharacterized protein {ECO:0000313|EMBL:ABF70007.1}
TAIRAT2G148501.00E-76Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000016990995993415-
Transcript Sequence

Network for GWHGAAEX013140

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12767.6SAGA-Tad162863.90E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0070461Cellular ComponentSAGA-type complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.560
SRR2545915Juvenile tuber17.410
SRP108465SRR5643513five period of Gastrodia elata11.110
SRR5643514five period of Gastrodia elata9.920
SRR5643515five period of Gastrodia elata12.320
SRR5643524five period of Gastrodia elata10.460
SRR5643525five period of Gastrodia elata14.970
SRR5643528five period of Gastrodia elata12.080
SRR5643658five period of Gastrodia elata12.340
SRR5643659five period of Gastrodia elata11.760
SRR5643660five period of Gastrodia elata11.360
SRR5643661five period of Gastrodia elata12.550
SRR5643662five period of Gastrodia elata13.240
SRR5643663five period of Gastrodia elata12.290
SRR5643664five period of Gastrodia elata13.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.710
SRR6049655Rhizomagastrodiae_C368-T10_good_18.220
SRR6049656Rhizomagastrodiae_C368-T07_good_19.900
SRR6049657Rhizomagastrodiae_C368-T07_good_112.210
SRR6049658Rhizomagastrodiae_C368-T04_good_112.030
SRR6049659Rhizomagastrodiae_C368-T04_good_113.350
SRR6049660Rhizomagastrodiae_C368-T01_good_110.260
SRR6049661Rhizomagastrodiae_C368-T04_good_111.520
SRR6049662Rhizomagastrodiae_C368-T01_good_18.960
SRR6049663Rhizomagastrodiae_C368-T01_good_19.350
SRR6049664Rhizomagastrodiae_C368-T10_good_110.700
SRR6049665Rhizomagastrodiae_C368-T10_good_110.700
SRP279888GastroGastrodia elata tuber 13.89
JuvenJuvenile tuber12.14
Mother_GastroMother tuber of Gastrodia elata 17.07
Mother_JuvenMother tuber of Juvenile 12.63