Detail information of GWHGAAEX013155/evm.TU.scaffold_5.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25822.00E-169COP9 signalosome, subunit CSN3
nrgi|743863876|ref|XP_010943897.1|0PREDICTED: COP9 signalosome complex subunit 3 [Elaeis guineensis]
Swissprottr|Q8W575|CSN3_ARATH1.00E-176COP9 signalosome complex subunit 3
trEMBLtr|M0RSD2|M0RSD2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P15020_001}
TAIRAT5G142502.00E-169Proteasome component (PCI) domain protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001611493051188991-
Transcript Sequence

Network for GWHGAAEX013155

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01399.26PCI2543573.70E-16
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.380
SRR2545915Juvenile tuber28.510
SRP108465SRR5643513five period of Gastrodia elata18.900
SRR5643514five period of Gastrodia elata25.050
SRR5643515five period of Gastrodia elata21.090
SRR5643524five period of Gastrodia elata25.390
SRR5643525five period of Gastrodia elata20.290
SRR5643528five period of Gastrodia elata22.220
SRR5643658five period of Gastrodia elata18.550
SRR5643659five period of Gastrodia elata25.050
SRR5643660five period of Gastrodia elata26.930
SRR5643661five period of Gastrodia elata26.260
SRR5643662five period of Gastrodia elata26.720
SRR5643663five period of Gastrodia elata26.790
SRR5643664five period of Gastrodia elata24.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.880
SRR6049655Rhizomagastrodiae_C368-T10_good_121.620
SRR6049656Rhizomagastrodiae_C368-T07_good_124.420
SRR6049657Rhizomagastrodiae_C368-T07_good_124.830
SRR6049658Rhizomagastrodiae_C368-T04_good_120.670
SRR6049659Rhizomagastrodiae_C368-T04_good_119.040
SRR6049660Rhizomagastrodiae_C368-T01_good_123.160
SRR6049661Rhizomagastrodiae_C368-T04_good_121.690
SRR6049662Rhizomagastrodiae_C368-T01_good_132.360
SRR6049663Rhizomagastrodiae_C368-T01_good_124.810
SRR6049664Rhizomagastrodiae_C368-T10_good_132.810
SRR6049665Rhizomagastrodiae_C368-T10_good_132.810
SRP279888GastroGastrodia elata tuber 37.82
JuvenJuvenile tuber39.69
Mother_GastroMother tuber of Gastrodia elata 30.73
Mother_JuvenMother tuber of Juvenile 34.14