Detail information of GWHGAAEX013156/evm.TU.scaffold_5.75
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|37519698|ref|NP_923075.1| | 1.00E-90 | oligopeptidase [Gloeobacter violaceus PCC 7421] |
| KOG | KOG2237 | 0 | Predicted serine protease |
| nr | gi|672186894|ref|XP_008813198.1| | 0 | PREDICTED: prolyl endopeptidase-like isoform X1 [Phoenix dactylifera] |
| trEMBL | tr|M0SUV7|M0SUV7_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P01780_001} |
| TAIR | AT5G66960 | 0 | Prolyl oligopeptidase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000016 | 1194992 | 1235442 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013156
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02897.14 | Peptidase_S9_N | 50 | 483 | 3.50E-34 |
| PF00326.20 | Peptidase_S9 | 580 | 749 | 4.60E-37 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0070008 | Molecular Function | serine-type exopeptidase activity |
| GO:0004252 | Molecular Function | serine-type endopeptidase activity |
| GO:0008236 | Molecular Function | serine-type peptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.840 |
| SRR2545915 | Juvenile tuber | 7.230 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.340 |
| SRR5643514 | five period of Gastrodia elata | 3.460 | |
| SRR5643515 | five period of Gastrodia elata | 3.390 | |
| SRR5643524 | five period of Gastrodia elata | 3.480 | |
| SRR5643525 | five period of Gastrodia elata | 2.720 | |
| SRR5643528 | five period of Gastrodia elata | 2.390 | |
| SRR5643658 | five period of Gastrodia elata | 1.920 | |
| SRR5643659 | five period of Gastrodia elata | 3.590 | |
| SRR5643660 | five period of Gastrodia elata | 4.040 | |
| SRR5643661 | five period of Gastrodia elata | 4.360 | |
| SRR5643662 | five period of Gastrodia elata | 4.230 | |
| SRR5643663 | five period of Gastrodia elata | 3.780 | |
| SRR5643664 | five period of Gastrodia elata | 3.750 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.290 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.630 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.460 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 7.410 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.810 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.400 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.760 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.550 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.990 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.220 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.220 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.68 |
| Juven | Juvenile tuber | 7.34 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.03 | |
| Mother_Juven | Mother tuber of Juvenile | 5.52 |