Detail information of GWHGAAEX013158/evm.TU.scaffold_5.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428779219|ref|YP_007171005.1|2.00E-49signal peptidase I [Dactylococcopsis salina PCC 8305]
KOGKOG01717.00E-92Mitochondrial inner membrane protease, subunit IMP1
nrgi|672186977|ref|XP_008813220.1|3.33E-124PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic [Phoenix dactylifera]
Swissprottr|Q9M9Z2|TPP2_ARATH2.00E-92Probable thylakoidal processing peptidase 2, chloroplastic (Precursor)
trEMBLtr|C5WZA4|C5WZA4_SORBI1.00E-110Putative uncharacterized protein Sb01g007080 {ECO:0000313|EMBL:EER90831.1}
TAIRAT1G068707.00E-92Peptidase S24/S26A/S26B/S26C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001612507961258982+
Transcript Sequence

Network for GWHGAAEX013158

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10502.8Peptidase_S263564581.40E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03100lepB Protein export map03060

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008236Molecular Functionserine-type peptidase activity
GO:0016020Cellular Componentmembrane
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms114.160
SRR2545915Juvenile tuber104.830
SRP108465SRR5643513five period of Gastrodia elata63.310
SRR5643514five period of Gastrodia elata67.610
SRR5643515five period of Gastrodia elata99.730
SRR5643524five period of Gastrodia elata76.890
SRR5643525five period of Gastrodia elata143.130
SRR5643528five period of Gastrodia elata149.090
SRR5643658five period of Gastrodia elata137.040
SRR5643659five period of Gastrodia elata92.100
SRR5643660five period of Gastrodia elata90.140
SRR5643661five period of Gastrodia elata102.510
SRR5643662five period of Gastrodia elata98.910
SRR5643663five period of Gastrodia elata70.320
SRR5643664five period of Gastrodia elata157.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_184.490
SRR6049655Rhizomagastrodiae_C368-T10_good_187.790
SRR6049656Rhizomagastrodiae_C368-T07_good_184.500
SRR6049657Rhizomagastrodiae_C368-T07_good_174.260
SRR6049658Rhizomagastrodiae_C368-T04_good_185.170
SRR6049659Rhizomagastrodiae_C368-T04_good_183.980
SRR6049660Rhizomagastrodiae_C368-T01_good_198.480
SRR6049661Rhizomagastrodiae_C368-T04_good_172.000
SRR6049662Rhizomagastrodiae_C368-T01_good_182.920
SRR6049663Rhizomagastrodiae_C368-T01_good_1108.920
SRR6049664Rhizomagastrodiae_C368-T10_good_184.420
SRR6049665Rhizomagastrodiae_C368-T10_good_184.420
SRP279888GastroGastrodia elata tuber 65.80
JuvenJuvenile tuber53.82
Mother_GastroMother tuber of Gastrodia elata 149.81
Mother_JuvenMother tuber of Juvenile 98.32