Detail information of GWHGAAEX013166/evm.TU.scaffold_5.85
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|220926268|ref|YP_002501570.1| | 4.00E-18 | heme peroxidase [Methylobacterium nodulans ORS 2060] |
| nr | gi|695005006|ref|XP_009388934.1| | 0 | PREDICTED: allene oxide synthase 1, chloroplastic-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q7Y0C8|C74A1_ORYSJ | 0 | Allene oxide synthase 1, chloroplastic (Precursor) |
| trEMBL | tr|I1GMX1|I1GMX1_BRADI | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G07480.1} |
| TAIR | AT5G42650 | 0 | allene oxide synthase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000016 | 1376701 | 1378453 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013166
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 335 | 443 | 1.70E-08 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP74A |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01723 | AOS | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004497 | Molecular Function | monooxygenase activity |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.860 |
| SRR2545915 | Juvenile tuber | 16.760 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 54.340 |
| SRR5643514 | five period of Gastrodia elata | 47.780 | |
| SRR5643515 | five period of Gastrodia elata | 47.600 | |
| SRR5643524 | five period of Gastrodia elata | 52.280 | |
| SRR5643525 | five period of Gastrodia elata | 31.000 | |
| SRR5643528 | five period of Gastrodia elata | 63.040 | |
| SRR5643658 | five period of Gastrodia elata | 26.130 | |
| SRR5643659 | five period of Gastrodia elata | 58.030 | |
| SRR5643660 | five period of Gastrodia elata | 59.840 | |
| SRR5643661 | five period of Gastrodia elata | 62.170 | |
| SRR5643662 | five period of Gastrodia elata | 63.620 | |
| SRR5643663 | five period of Gastrodia elata | 58.850 | |
| SRR5643664 | five period of Gastrodia elata | 51.740 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 50.740 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 55.840 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 49.950 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 36.450 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 42.510 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 31.400 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 44.370 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 35.760 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 58.200 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 47.900 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 72.380 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 72.380 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.33 |
| Juven | Juvenile tuber | 33.62 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 65.59 | |
| Mother_Juven | Mother tuber of Juvenile | 63.74 |