Detail information of GWHGAAEX013169/evm.TU.scaffold_5.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672178673|ref|XP_008809476.1|1.45E-18PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Phoenix dactylifera]
Swissprottr|O23164|CRPM4_ARATH9.00E-08Cold-regulated 413 plasma membrane protein 4
trEMBLtr|A0A059APG5|A0A059APG5_EUCGR2.00E-14Uncharacterized protein {ECO:0000313|EMBL:KCW55305.1}
TAIRAT4G372203.00E-07Cold acclimation protein WCOR413 family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001614018321402338+
Transcript Sequence

Network for GWHGAAEX013169

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05562.10WCOR4139639.50E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.360
SRR2545915Juvenile tuber1.630
SRP108465SRR5643513five period of Gastrodia elata18.520
SRR5643514five period of Gastrodia elata13.550
SRR5643515five period of Gastrodia elata12.640
SRR5643524five period of Gastrodia elata7.400
SRR5643525five period of Gastrodia elata40.940
SRR5643528five period of Gastrodia elata31.450
SRR5643658five period of Gastrodia elata38.090
SRR5643659five period of Gastrodia elata35.240
SRR5643660five period of Gastrodia elata27.490
SRR5643661five period of Gastrodia elata26.560
SRR5643662five period of Gastrodia elata15.560
SRR5643663five period of Gastrodia elata34.160
SRR5643664five period of Gastrodia elata26.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.100
SRR6049655Rhizomagastrodiae_C368-T10_good_151.180
SRR6049656Rhizomagastrodiae_C368-T07_good_140.790
SRR6049657Rhizomagastrodiae_C368-T07_good_124.560
SRR6049658Rhizomagastrodiae_C368-T04_good_172.880
SRR6049659Rhizomagastrodiae_C368-T04_good_147.530
SRR6049660Rhizomagastrodiae_C368-T01_good_141.210
SRR6049661Rhizomagastrodiae_C368-T04_good_146.990
SRR6049662Rhizomagastrodiae_C368-T01_good_148.870
SRR6049663Rhizomagastrodiae_C368-T01_good_144.520
SRR6049664Rhizomagastrodiae_C368-T10_good_154.690
SRR6049665Rhizomagastrodiae_C368-T10_good_154.690
SRP279888GastroGastrodia elata tuber 27.47
JuvenJuvenile tuber11.85
Mother_GastroMother tuber of Gastrodia elata 62.72
Mother_JuvenMother tuber of Juvenile 22.40