Detail information of GWHGAAEX013171/evm.TU.scaffold_5.90


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720055981|ref|XP_010273556.1|0PREDICTED: uncharacterized membrane protein At1g16860-like [Nelumbo nucifera]
Swissprottr|Q9FZ45|Y1686_ARATH0Uncharacterized membrane protein At1g16860
trEMBLtr|A5AF64|A5AF64_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN82086.1}
TAIRAT1G168600Ubiquitin-specific protease family C19-related protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001614101571422190-
Transcript Sequence

Network for GWHGAAEX013171

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.580
SRR2545915Juvenile tuber39.980
SRP108465SRR5643513five period of Gastrodia elata34.550
SRR5643514five period of Gastrodia elata36.390
SRR5643515five period of Gastrodia elata30.600
SRR5643524five period of Gastrodia elata37.180
SRR5643525five period of Gastrodia elata36.370
SRR5643528five period of Gastrodia elata29.830
SRR5643658five period of Gastrodia elata40.230
SRR5643659five period of Gastrodia elata43.880
SRR5643660five period of Gastrodia elata44.730
SRR5643661five period of Gastrodia elata48.440
SRR5643662five period of Gastrodia elata48.190
SRR5643663five period of Gastrodia elata51.410
SRR5643664five period of Gastrodia elata49.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.750
SRR6049655Rhizomagastrodiae_C368-T10_good_127.880
SRR6049656Rhizomagastrodiae_C368-T07_good_129.630
SRR6049657Rhizomagastrodiae_C368-T07_good_136.370
SRR6049658Rhizomagastrodiae_C368-T04_good_131.480
SRR6049659Rhizomagastrodiae_C368-T04_good_139.100
SRR6049660Rhizomagastrodiae_C368-T01_good_131.420
SRR6049661Rhizomagastrodiae_C368-T04_good_132.150
SRR6049662Rhizomagastrodiae_C368-T01_good_125.800
SRR6049663Rhizomagastrodiae_C368-T01_good_128.220
SRR6049664Rhizomagastrodiae_C368-T10_good_130.000
SRR6049665Rhizomagastrodiae_C368-T10_good_130.000
SRP279888GastroGastrodia elata tuber 50.68
JuvenJuvenile tuber51.34
Mother_GastroMother tuber of Gastrodia elata 20.14
Mother_JuvenMother tuber of Juvenile 27.36