Gene detail

Detail information of GWHGAAEX013177/evm.TU.scaffold_5.96

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2293	1.00E-54	Daxx-interacting protein MSP58/p78, contains FHA domain
nr	gi\|672145457\|ref\|XP_008796646.1\|	0	PREDICTED: uncharacterized protein LOC103712048 [Phoenix dactylifera]
trEMBL	tr\|M0SYM9\|M0SYM9_MUSAM	6.00E-157	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P15000_001}
TAIR	AT3G54350	1.00E-54	Forkhead-associated (FHA) domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000016	1598542	1635174	+

Transcript Sequence
>GWHTAAEX013177 ATTTGCTAGTTTCGAAACCCATAAAACCTAGACGAGCTCTAACCCCACCCAGTGGACGGGAAGAACGGATGGGCGCTAGCACGTCCTTCACAAAATGGCATCCAGAGGACGATCTCCTCCTCAAGAATGCCGTCGAGGCTGGTGCATCGCTGGAGTCATTAGCCAAAGGAGCTGTTCATTTTTCCCAACGGTTCACTGTTCGAGAACTAGAAGATCGGTGGTGTTCACTTCTCTATGACCTTAATACATCAACCGAGGCATCTGCACGCATTATAGAGATTGAGATTGGAGCATCGATCAATAATCCCTTAAAATCTGGCCGAGCTTGCAATTCCAAAGCAAAGGAGACTTCATACAATAAAAGAAAAGGAGAAAGTTTGCAGTGCCGCTACTACACAGCAAGAAAGAAAGCTCGAAGTGAACCGCATAAACCTTTAAAATTGGCTTTTATCATATCTCCAAGCTCACATGCTGCTATTGCCAGTGATATCAGTGCATCTGATCAATTTAAGTTGCAGAATGAGTTTGAGCTCATTAAATATCCCACACACATTCCTTTTACTGATGATTATGGACATCCAGAAACAATTTATGGGTGTAACCAACGTGTTTACCCTAAAATAGTTGACACGGCTCCTCCAAGTACTCTCACTTTTCATGGAGGAATGGTTGATTCGATTGAGACTTCACTTCCAGCTGGAATATCAGGCACTGATTGCCTATATGGGCATGTGGAAAATACTCCTATTCCACTAGATGAAGTTGGATTTAATGATGCAAGTGAGAATTTTGAACCAAACCTAACACAGAAAAAGTATTCCCATGCACTTGATAGAAATAATTGCCCATCACAGATGTTGGATGCTCCGGAATCTAAATCTTCATTTCATCATCTTGGGTATTCCACTTCTCCATCTGGTCCTCCTATTTGGAAAGCAATAGAGGATTCTTCTACACCAACTATTCAAATGGATGGGCAGTTTAAGGACAAAGGCCGAGGAGCGGTCAACATTCGTTGTATCAATAAAATAGATGATCAACCCTGTGATAATACCTCAAAAAACAAGTTAATTGATGGCACATCTGCTGCATCAAATAATTCAACAATTCCATTGGAAGCCAACTTTATTGACTTTTCTGACTCATGCATGAGCTTTACTGATGATGAGGAGCTCCTTTTGATTGATGTGGATGATGATGATGTCGAGGATAGGTCTTGCTTAAATGATATTGACACCGTATTCATAGGTTCTCCTGCAGCTGCCGACATGGATAATTTGCACATTCCTAACGAAATTAAGCCTTCAGAGGTCTTTGATGTTCCTTTTTGTAATGATGCCGGGAGTTCTTTGGAACAGGAAATTATTCGCGAAGAACTACATACAGACAATAGTGATCTTCATATTTCAGTTGTTCCAGCAGTCAGCATTTTGACCTCATCTTCTGGATCTTCTCCTATTGCAGTGGCCATTGAAAAGTTAATGATTTGTGTATTGAACACAGAGGACAAAGATATTCCATGCAATGATGATGCTACTTTTCCGGCAAAGTTCTTTCAAGCGTTCCCAATTCATCTGAAGCAAGATATTTCATCCAGTCTGGCACATGATGGGAAGATCACATCTGCAGATTGCTCATTAGTTAAAGAAGGGAAAACAGGCATGCTGCCTATTGTATCCAATGTGAAAGCAGGACAATCAGTGCTGCCAAAAGTTAGTTTGCTACAGCCAACTGCTGATTGCAAGCTGGAATCTGCGTTATCCGAAAAGGATTTGCTTTATCAATCATCCACCACATTAGCCAAAGATATCGATGATCCAAGTTTGATTCCATCAGTTATTCCATCACACTTTGCACCCGGTCGTTCTTTGAAGCAAGAAGCTACGACTGAAACAAATTTGCATGTTTCATGCCTTTCATCACACCCAGAACTTGTTTCTTCAGAGCTGGGCTCTGTAGATCTACTTCCAACAATGTCAATTTCTGACGATGAGCAATTTCCTGAGAATGAAGAAGAAGATGAAGATGATGTACCTTATTTTTCTGATGTAGAGGATTTGATACTTGGTATGGATTTGGATCCATATGATCAGGAATCATGCCTTTTTACTAAGGAAGTGTCAAGGTACCAATGCATGAACACCAAGAAGACGATCATTAGATTGGAACAAAGTGCACGTTCTTATGTGAATAGAGCCATTTCATCCCATGGTGCTTTTGCAATTTTTTATGGCCGCCGTTTGAAATATTTCATCAAAAGTCCTGAGGTGTTGCTTGGAAGGGAAACAGAAGATATTAAAGTTGACATTGACTTAGGCAAAGAAGGTCGTGCTAATAAGATATCTCGACGGCAGGCAATTATTAAGATGGATGAGGATGGATATTTCCATCTCAAAAACATTGGCAAGAGCTCAATTTTTGTTAATAGCAAAGAAGTTCCAGCAAAGAAGCGCATTAACTTGTGCTTGTCGGCTTTGATTGAGATTAAAGACATGAGATTCTTATTTGAGGTGAATGAACGTGCAGTGAGGCGACACGTGGCTTCAATCCAACGGGTTAGTAGTCATCAACCCAAATCAGAATTCGATTTCCCCTACAGCTGACAATCTCACTTTGTTACTAGTTTTTATTTTATTTTATTTACGAAGTTAATTGCATAAAGTGCTTCTATATATTTTAGCATAGGATAATCAGACCAAAACTTGATCAGGGCAAGCTCTTAGGAGCTGTTGAATGTGCTTTCTAAACCCTCCCTTCTTATTTTAAAGCACATCCAAGCATTTCGAACATAAGATCTGCCATTCTGCCCATCAAAATATGCTCAAATTTTCCAGAAGTTTGAGATAATAATATTCTATTAAAAAAAATAAATTGGGACTACACATTTCACAATGACATCTCACTTTTTGGAGATTTTGGCTTCAAAATTTTGGTTTGATTATTCTCACATATTTCTACTACTACTACTACTATTATTATTATTATGGGGTATAATTATTTGCTGATAATACATGTAATGGGAAGATGATTTTGTGAAAGCTTGGCTTTGTAAGTATCGTTTCTTTTGTAAATTTTACCTGATTTTTATAGTTGCTATTTTGTGTATGTAAAGTGAGATGTTTGGTAAGCATCAAGATTATGATGTATGTATATAAAGTATGCCTCCTCATTT

Network for GWHGAAEX013177

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13325.5	MCRS_N	9	72	1.40E-14
PF00498.25	FHA	735	798	2.50E-05

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	22.910
SRP064423	SRR2545915	Juvenile tuber	44.520
SRP108465	SRR5643513	five period of Gastrodia elata	20.650
	SRR5643514	five period of Gastrodia elata	17.920
	SRR5643515	five period of Gastrodia elata	21.250
	SRR5643524	five period of Gastrodia elata	22.440
	SRR5643525	five period of Gastrodia elata	13.210
	SRR5643528	five period of Gastrodia elata	13.230
	SRR5643658	five period of Gastrodia elata	14.220
	SRR5643659	five period of Gastrodia elata	18.220
	SRR5643660	five period of Gastrodia elata	21.690
	SRR5643661	five period of Gastrodia elata	19.430
	SRR5643662	five period of Gastrodia elata	22.180
	SRR5643663	five period of Gastrodia elata	22.670
	SRR5643664	five period of Gastrodia elata	19.060
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.950
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.840
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	20.160
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	23.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.370
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.790
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.740
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	17.550
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	14.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	14.700
SRP279888	Gastro	Gastrodia elata tuber	31.46
	Juven	Juvenile tuber	46.64
	Mother_Gastro	Mother tuber of Gastrodia elata	22.57
	Mother_Juven	Mother tuber of Juvenile	42.76