Detail information of GWHGAAEX013178/evm.TU.scaffold_5.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|507379855|ref|YP_008018149.1|1.00E-19thioredoxin [Spiroplasma chrysopicola DF-1]
KOGKOG09073.00E-44Thioredoxin
nrgi|743790958|ref|XP_010923297.1|4.16E-55PREDICTED: thioredoxin H2-2-like [Elaeis guineensis]
Swissprottr|Q851R5|TRH22_ORYSJ7.00E-56Thioredoxin H2-2
trEMBLtr|K4AGJ6|K4AGJ6_SETIT1.00E-54Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}
TAIRAT5G399503.00E-44thioredoxin 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001616406561641558+
Transcript Sequence

Network for GWHGAAEX013178

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.19Thioredoxin361251.20E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03671trxA NOD-like receptor signaling pathway map04621

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis
GO:0006662Biological Processglycerol ether metabolic process
GO:0015035Molecular Functionprotein disulfide oxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.770
SRR2545915Juvenile tuber15.710
SRP108465SRR5643513five period of Gastrodia elata27.670
SRR5643514five period of Gastrodia elata24.780
SRR5643515five period of Gastrodia elata31.030
SRR5643524five period of Gastrodia elata33.290
SRR5643525five period of Gastrodia elata1101.760
SRR5643528five period of Gastrodia elata849.940
SRR5643658five period of Gastrodia elata301.410
SRR5643659five period of Gastrodia elata37.550
SRR5643660five period of Gastrodia elata20.340
SRR5643661five period of Gastrodia elata32.270
SRR5643662five period of Gastrodia elata23.550
SRR5643663five period of Gastrodia elata33.980
SRR5643664five period of Gastrodia elata26.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.480
SRR6049655Rhizomagastrodiae_C368-T10_good_120.590
SRR6049656Rhizomagastrodiae_C368-T07_good_124.910
SRR6049657Rhizomagastrodiae_C368-T07_good_127.140
SRR6049658Rhizomagastrodiae_C368-T04_good_125.030
SRR6049659Rhizomagastrodiae_C368-T04_good_122.140
SRR6049660Rhizomagastrodiae_C368-T01_good_118.590
SRR6049661Rhizomagastrodiae_C368-T04_good_123.380
SRR6049662Rhizomagastrodiae_C368-T01_good_127.110
SRR6049663Rhizomagastrodiae_C368-T01_good_114.150
SRR6049664Rhizomagastrodiae_C368-T10_good_134.800
SRR6049665Rhizomagastrodiae_C368-T10_good_134.800
SRP279888GastroGastrodia elata tuber 23.52
JuvenJuvenile tuber161.62
Mother_GastroMother tuber of Gastrodia elata 69.52
Mother_JuvenMother tuber of Juvenile 33.82