Detail information of GWHGAAEX013179/evm.TU.scaffold_5.98


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|507379855|ref|YP_008018149.1|3.00E-19thioredoxin [Spiroplasma chrysopicola DF-1]
KOGKOG09075.00E-43Thioredoxin
nrgi|363543441|ref|NP_001241730.1|8.30E-56thioredoxin H-type 5 [Zea mays]
Swissprottr|Q851R5|TRH22_ORYSJ8.00E-57Thioredoxin H2-2
trEMBLtr|B6SL60|B6SL60_MAIZE3.00E-56Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}
TAIRAT5G399505.00E-43thioredoxin 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001616418291643556+
Transcript Sequence

Network for GWHGAAEX013179

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.19Thioredoxin261254.70E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03671trxA NOD-like receptor signaling pathway map04621

Gene Ontology

GO term OntologyName
GO:0006662Biological Processglycerol ether metabolic process
GO:0045454Biological Processcell redox homeostasis
GO:0015035Molecular Functionprotein disulfide oxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.270
SRR2545915Juvenile tuber15.560
SRP108465SRR5643513five period of Gastrodia elata25.890
SRR5643514five period of Gastrodia elata28.970
SRR5643515five period of Gastrodia elata28.000
SRR5643524five period of Gastrodia elata28.420
SRR5643525five period of Gastrodia elata33.500
SRR5643528five period of Gastrodia elata63.290
SRR5643658five period of Gastrodia elata37.290
SRR5643659five period of Gastrodia elata35.540
SRR5643660five period of Gastrodia elata34.970
SRR5643661five period of Gastrodia elata36.140
SRR5643662five period of Gastrodia elata32.110
SRR5643663five period of Gastrodia elata28.250
SRR5643664five period of Gastrodia elata26.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.180
SRR6049655Rhizomagastrodiae_C368-T10_good_126.370
SRR6049656Rhizomagastrodiae_C368-T07_good_122.540
SRR6049657Rhizomagastrodiae_C368-T07_good_117.190
SRR6049658Rhizomagastrodiae_C368-T04_good_117.520
SRR6049659Rhizomagastrodiae_C368-T04_good_113.690
SRR6049660Rhizomagastrodiae_C368-T01_good_116.610
SRR6049661Rhizomagastrodiae_C368-T04_good_119.860
SRR6049662Rhizomagastrodiae_C368-T01_good_122.050
SRR6049663Rhizomagastrodiae_C368-T01_good_117.550
SRR6049664Rhizomagastrodiae_C368-T10_good_124.890
SRR6049665Rhizomagastrodiae_C368-T10_good_124.890
SRP279888GastroGastrodia elata tuber 35.08
JuvenJuvenile tuber28.93
Mother_GastroMother tuber of Gastrodia elata 51.81
Mother_JuvenMother tuber of Juvenile 33.65