Detail information of GWHGAAEX013180/evm.TU.scaffold_5.99


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116751305|ref|YP_847992.1|3.00E-08glycoside hydrolase family 13 [Syntrophobacter fumaroxidans MPOB]
KOGKOG16161.00E-79Protein involved in Snf1 protein kinase complex assembly
nrgi|672175592|ref|XP_008807857.1|1.19E-111PREDICTED: uncharacterized protein LOC103720093 isoform X1 [Phoenix dactylifera]
trEMBLtr|M5Y1Q1|M5Y1Q1_PRUPE2.00E-90Uncharacterized protein {ECO:0000313|EMBL:EMJ25610.1}
TAIRAT1G270701.00E-795'-AMP-activated protein kinase-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001616463741672527-
Transcript Sequence

Network for GWHGAAEX013180

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16561.4AMPK1_CBM4635322.40E-16
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM48

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.330
SRR2545915Juvenile tuber20.500
SRP108465SRR5643513five period of Gastrodia elata9.210
SRR5643514five period of Gastrodia elata9.420
SRR5643515five period of Gastrodia elata10.200
SRR5643524five period of Gastrodia elata9.840
SRR5643525five period of Gastrodia elata15.120
SRR5643528five period of Gastrodia elata14.330
SRR5643658five period of Gastrodia elata18.550
SRR5643659five period of Gastrodia elata12.710
SRR5643660five period of Gastrodia elata14.560
SRR5643661five period of Gastrodia elata12.280
SRR5643662five period of Gastrodia elata12.430
SRR5643663five period of Gastrodia elata13.790
SRR5643664five period of Gastrodia elata13.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.370
SRR6049655Rhizomagastrodiae_C368-T10_good_19.730
SRR6049656Rhizomagastrodiae_C368-T07_good_113.460
SRR6049657Rhizomagastrodiae_C368-T07_good_114.230
SRR6049658Rhizomagastrodiae_C368-T04_good_112.710
SRR6049659Rhizomagastrodiae_C368-T04_good_111.060
SRR6049660Rhizomagastrodiae_C368-T01_good_112.570
SRR6049661Rhizomagastrodiae_C368-T04_good_112.930
SRR6049662Rhizomagastrodiae_C368-T01_good_114.480
SRR6049663Rhizomagastrodiae_C368-T01_good_110.930
SRR6049664Rhizomagastrodiae_C368-T10_good_19.400
SRR6049665Rhizomagastrodiae_C368-T10_good_19.400
SRP279888GastroGastrodia elata tuber 11.57
JuvenJuvenile tuber17.16
Mother_GastroMother tuber of Gastrodia elata 6.26
Mother_JuvenMother tuber of Juvenile 11.66