Detail information of GWHGAAEX013181/evm.TU.scaffold_5.100


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|17548871|ref|NP_522211.1|0methylmalonate-semialdehyde dehydrogenase oxidoreductase [Ralstonia solanacearum GMI1000]
KOGKOG24490Methylmalonate semialdehyde dehydrogenase
nrgi|695022522|ref|XP_009398393.1|0PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Musa acuminata subsp. malaccensis]
Swissprottr|Q0WM29|MMSA_ARATH0Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (Precursor)
trEMBLtr|M0SR49|M0SR49_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P22360_001}
TAIRAT2G141700aldehyde dehydrogenase 6B2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001616773651731423+
Transcript Sequence

Network for GWHGAAEX013181

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00171.21Aldedh365003.00E-136
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00140mmsA, iolA, ALDH6A1 Metabolic pathways map01100
Carbon metabolismmap01200
Propanoate metabolismmap00640
Inositol phosphate metabolismmap00562
Cysteine and methionine metabolismmap00270
beta-Alanine metabolismmap00410

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0004491Molecular Functionmethylmalonate-semialdehyde dehydrogenase (acylating) activity
GO:0016491Molecular Functionoxidoreductase activity
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.020
SRR2545915Juvenile tuber48.720
SRP108465SRR5643513five period of Gastrodia elata50.770
SRR5643514five period of Gastrodia elata46.880
SRR5643515five period of Gastrodia elata45.940
SRR5643524five period of Gastrodia elata43.460
SRR5643525five period of Gastrodia elata74.830
SRR5643528five period of Gastrodia elata56.040
SRR5643658five period of Gastrodia elata70.450
SRR5643659five period of Gastrodia elata26.280
SRR5643660five period of Gastrodia elata33.130
SRR5643661five period of Gastrodia elata29.760
SRR5643662five period of Gastrodia elata25.500
SRR5643663five period of Gastrodia elata25.840
SRR5643664five period of Gastrodia elata29.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_158.990
SRR6049655Rhizomagastrodiae_C368-T10_good_149.100
SRR6049656Rhizomagastrodiae_C368-T07_good_162.090
SRR6049657Rhizomagastrodiae_C368-T07_good_169.650
SRR6049658Rhizomagastrodiae_C368-T04_good_177.860
SRR6049659Rhizomagastrodiae_C368-T04_good_183.360
SRR6049660Rhizomagastrodiae_C368-T01_good_172.230
SRR6049661Rhizomagastrodiae_C368-T04_good_173.920
SRR6049662Rhizomagastrodiae_C368-T01_good_154.680
SRR6049663Rhizomagastrodiae_C368-T01_good_159.920
SRR6049664Rhizomagastrodiae_C368-T10_good_154.470
SRR6049665Rhizomagastrodiae_C368-T10_good_154.470
SRP279888GastroGastrodia elata tuber 28.35
JuvenJuvenile tuber39.40
Mother_GastroMother tuber of Gastrodia elata 26.05
Mother_JuvenMother tuber of Juvenile 38.98