Detail information of GWHGAAEX013184/evm.TU.scaffold_5.103


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30941.00E-141Predicted membrane protein
nrgi|672165141|ref|XP_008802466.1|6.22E-164PREDICTED: protein YIF1B-B-like [Phoenix dactylifera]
trEMBLtr|M0SR47|M0SR47_MUSAM9.00E-160Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P22340_001}
TAIRAT1G308901.00E-141Integral membrane HRF1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001617752541776811-
Transcript Sequence

Network for GWHGAAEX013184

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03878.14YIF1412621.70E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006888Biological ProcessER to Golgi vesicle-mediated transport
GO:0005789Cellular Componentendoplasmic reticulum membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.800
SRR2545915Juvenile tuber25.590
SRP108465SRR5643513five period of Gastrodia elata44.310
SRR5643514five period of Gastrodia elata43.340
SRR5643515five period of Gastrodia elata50.000
SRR5643524five period of Gastrodia elata44.660
SRR5643525five period of Gastrodia elata57.070
SRR5643528five period of Gastrodia elata55.120
SRR5643658five period of Gastrodia elata47.610
SRR5643659five period of Gastrodia elata49.060
SRR5643660five period of Gastrodia elata50.700
SRR5643661five period of Gastrodia elata47.330
SRR5643662five period of Gastrodia elata41.300
SRR5643663five period of Gastrodia elata37.780
SRR5643664five period of Gastrodia elata29.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_158.110
SRR6049655Rhizomagastrodiae_C368-T10_good_132.080
SRR6049656Rhizomagastrodiae_C368-T07_good_156.100
SRR6049657Rhizomagastrodiae_C368-T07_good_148.680
SRR6049658Rhizomagastrodiae_C368-T04_good_150.380
SRR6049659Rhizomagastrodiae_C368-T04_good_149.970
SRR6049660Rhizomagastrodiae_C368-T01_good_150.750
SRR6049661Rhizomagastrodiae_C368-T04_good_148.560
SRR6049662Rhizomagastrodiae_C368-T01_good_163.420
SRR6049663Rhizomagastrodiae_C368-T01_good_158.130
SRR6049664Rhizomagastrodiae_C368-T10_good_164.850
SRR6049665Rhizomagastrodiae_C368-T10_good_164.850
SRP279888GastroGastrodia elata tuber 29.33
JuvenJuvenile tuber33.52
Mother_GastroMother tuber of Gastrodia elata 41.54
Mother_JuvenMother tuber of Juvenile 35.17