Detail information of GWHGAAEX013191/evm.TU.scaffold_5.112


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695050603|ref|XP_009413295.1|0PREDICTED: uncharacterized protein LOC103994629 [Musa acuminata subsp. malaccensis]
trEMBLtr|I1H2Y2|I1H2Y2_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G54990.1}
TAIRAT2G392100Major facilitator superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001620248862026969-
Transcript Sequence

Network for GWHGAAEX013191

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06813.12Nodulin-like542982.20E-83
PF07690.15MFS_14416191.30E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0005887Cellular Componentintegral component of plasma membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.150
SRR2545915Juvenile tuber0.040
SRP108465SRR5643513five period of Gastrodia elata7.220
SRR5643514five period of Gastrodia elata4.070
SRR5643515five period of Gastrodia elata5.330
SRR5643524five period of Gastrodia elata2.060
SRR5643525five period of Gastrodia elata0.540
SRR5643528five period of Gastrodia elata0.490
SRR5643658five period of Gastrodia elata0.230
SRR5643659five period of Gastrodia elata0.150
SRR5643660five period of Gastrodia elata0.070
SRR5643661five period of Gastrodia elata0.380
SRR5643662five period of Gastrodia elata0.840
SRR5643663five period of Gastrodia elata0.330
SRR5643664five period of Gastrodia elata0.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_159.070
SRR6049655Rhizomagastrodiae_C368-T10_good_175.700
SRR6049656Rhizomagastrodiae_C368-T07_good_140.670
SRR6049657Rhizomagastrodiae_C368-T07_good_116.310
SRR6049658Rhizomagastrodiae_C368-T04_good_129.290
SRR6049659Rhizomagastrodiae_C368-T04_good_138.500
SRR6049660Rhizomagastrodiae_C368-T01_good_17.240
SRR6049661Rhizomagastrodiae_C368-T04_good_129.980
SRR6049662Rhizomagastrodiae_C368-T01_good_1107.570
SRR6049663Rhizomagastrodiae_C368-T01_good_135.050
SRR6049664Rhizomagastrodiae_C368-T10_good_1173.340
SRR6049665Rhizomagastrodiae_C368-T10_good_1173.340
SRP279888GastroGastrodia elata tuber 0.19
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 1.45
Mother_JuvenMother tuber of Juvenile 2.07