Detail information of GWHGAAEX013192/evm.TU.scaffold_5.113


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13390Aspartyl protease
nrgi|743790876|ref|XP_010923278.1|0PREDICTED: aspartic proteinase-like protein 2 [Elaeis guineensis]
Swissprottr|Q9S9K4|ASPL2_ARATH1.00E-92Aspartic proteinase-like protein 2 (Precursor)
trEMBLtr|B6TNP6|B6TNP6_MAIZE0Aspartic proteinase nepenthesin-2 {ECO:0000313|EMBL:ACG38729.1}
TAIRAT5G228500Eukaryotic aspartyl protease family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001620414492048202-
Transcript Sequence

Network for GWHGAAEX013192

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14543.5TAXi_N1883757.60E-39
PF14541.5TAXi_C3945463.10E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004190Molecular Functionaspartic-type endopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms113.080
SRR2545915Juvenile tuber87.470
SRP108465SRR5643513five period of Gastrodia elata72.370
SRR5643514five period of Gastrodia elata66.250
SRR5643515five period of Gastrodia elata97.140
SRR5643524five period of Gastrodia elata71.220
SRR5643525five period of Gastrodia elata197.160
SRR5643528five period of Gastrodia elata304.900
SRR5643658five period of Gastrodia elata223.600
SRR5643659five period of Gastrodia elata68.100
SRR5643660five period of Gastrodia elata57.750
SRR5643661five period of Gastrodia elata72.410
SRR5643662five period of Gastrodia elata95.160
SRR5643663five period of Gastrodia elata71.650
SRR5643664five period of Gastrodia elata140.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_195.280
SRR6049655Rhizomagastrodiae_C368-T10_good_197.640
SRR6049656Rhizomagastrodiae_C368-T07_good_192.280
SRR6049657Rhizomagastrodiae_C368-T07_good_194.860
SRR6049658Rhizomagastrodiae_C368-T04_good_1107.620
SRR6049659Rhizomagastrodiae_C368-T04_good_1114.030
SRR6049660Rhizomagastrodiae_C368-T01_good_1104.810
SRR6049661Rhizomagastrodiae_C368-T04_good_190.690
SRR6049662Rhizomagastrodiae_C368-T01_good_178.270
SRR6049663Rhizomagastrodiae_C368-T01_good_1103.330
SRR6049664Rhizomagastrodiae_C368-T10_good_1105.470
SRR6049665Rhizomagastrodiae_C368-T10_good_1105.470
SRP279888GastroGastrodia elata tuber 88.21
JuvenJuvenile tuber58.65
Mother_GastroMother tuber of Gastrodia elata 446.46
Mother_JuvenMother tuber of Juvenile 452.98