Gene detail

Detail information of GWHGAAEX013195/evm.TU.scaffold_5.116

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|221633431\|ref\|YP_002522656.1\|	8.00E-17	chaperone protein DnaJ [Thermomicrobium roseum DSM 5159]
KOG	KOG0691	0	Molecular chaperone (DnaJ superfamily)
nr	gi\|731427652\|ref\|XP_010664055.1\|	0	PREDICTED: chaperone protein dnaJ 10 isoform X2 [Vitis vinifera]
Swissprot	tr\|Q8GYX8\|DNJ10_ARATH	0	Chaperone protein dnaJ 10
trEMBL	tr\|A0A067KWU7\|A0A067KWU7_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP36705.1}
TAIR	AT1G21080	0	DNAJ heat shock N-terminal domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000016	2085823	2138269	+

Transcript Sequence
>GWHTAAEX013195 GGGAATAATTCGGAGACCTTCCCGTCAGGTTCCGAAGTGTGAGCCGGAGACTGGAGGTCAGCGGAGAATGGAATGAGATTTGTCACTTTCCGGAGAAATCAAAACTTCATTCTCTCTCATTTCTCTCGCGCAGCCTTGCTGCTAGTCTCGCGGCTCTTCTTCCTCGCTCCTTCTGCGGAAGAGGAAGGCTATTGATTGGAAGAAATCAATAGAGGAGGGCCGGGAGGACCGGGATTCTGCTTGGTATCAGACGGAATTAGGTCTTGAAACCGGATCTGCGCAGTGTCTGGGAGAAGATGGTGAAGGAGACAGATTATTACGACGTGCTGGGAGTCAGTCCGTTGGCTACGGAGGCGGAGATCAAGAAGGCGTACTACATCAAGGCAAGACAAGTTCATCCAGATAAAAATCAAAATGATCCACAAGCGGCACAAAAATTTCAGGATTTGGGAGAGGCCTATCAAGTACTTGGCAATTCTTCACAGCGTCAAGCTTATGATGCTCTTGGGAAATCAGGAATCTCAACAGATTCTATCATTGATCCTGCCGCAATCTTTGCAATGCTTTTTGGGAGTGAACTTTTTGAAGAGTACATTGGCCAATTAGCTATGGCTTCAATGGCTTCACTTGACATATTTGACGAAGGGGAACAAATAGATGCTAAAAAACTGCAGGAGAAAATGAAGGTTGTCCAGAAGGAAAGAGAGGCCAAGCTTGCAGAAATACTTAAAGATCGATTGCACCAGTATGTTATAGGTAACGAGGAAGGTTTTCGTAGTAATGCTGATGCTGAAGTGGCAAAGCTTTCTAACGCAGCATATGGAGTTGATATGCTTAACACCATTGGCTACATATATGCAAGGCAAGCCGCAATGGAGTTGGGGAAAAAAGCAATATATTTAGGTGTGCCATTTGTAGCTGAATTGTTCAGAAGCAAAGGGCATTTCATTAAATCCCAAGTAACAGCTGCTACAGGTGCAATAGCTCTTATGCAATTGCAAGAGGACTTGAAGAGACAGCTTAGTGCTGAGGGGAACTACACCGAAGAAGAACTTGAAGAATACTTGCGGTCCCACAAGAAGCTGATGATTGATTCTTTGTGGAAGCTCAATGTTGCAGATATTGAAGCTACACTTGTGAATGTTTGTCAAAAGGTTCTTCAGGACAGTTCTATCAGGCGGGAGGAACTTCGGGCTAAGGCTAAAGCACTGAAAATTCTCGGAAAAAAATTTCAGAGGGCCAAGTCAGGTGATACCGAGTCATCATTTACCAGCGATTCTCACAAGCTGAATGGAAGCGAGCAGAGCACAGATGGTAGCTTGCCTTACACGCAGCCTAAGTCGTCTACTGAAGAACCGTACTACACGACTCTTTCAGCGCAGTGCCCATATGTGGAGGCTCCTTCCTTCACAGGTGCTCAGTGCAGCTACAACTATCCAATGCCCACCTCTCCACCAGGTGCACTAAGGCAGCCCTAAAGAGCAGAACAAGCCACAAAGCTAAGCACCTGAACATGCTTGTTTTTTTTTCTTTTTTTGTACAACGTTTTGTATTATATTGCCATTGTAATGTTTTTGTGCTCATTATTTGATGAAATAGCAGGACTTTTAGCTCATCTTTTTTTCTTTTTTTCTTTTATTTTTATAAATTATTTTTGCTGGTGATTATCTATTCTTTGTTGTTGTGGCTGTTGTTGTTCTTGCCCTTTTTTTATGCATATTTGCAAAGAGAGGATTGCACTGTGTATATACTGCATTATTATTAGTTGTCTGCTTTTTTATTTTATTTTATTTAGAATTTACTCTTCGAGTGAATTTGTAATGCATCAAGACAGTTCAATAATTGCATGTAAATGTCAAATACCATGCAAATTTTTATTTTATACATAACCAAGACTTCTTCAAAGATGAAGTAAATGTGTGGCCAGTGAAATTTGAATCTCATACCTGCAATAATAAATTCTGAGCCTCAGCTGCAACAGTGCTCGAGACTTTCCCAAGTGCTTTTGTTTTCAAAAGTTGCTAAAGCATATGCTATAAAGAATAACAAAGAATCTGTGAAGGCTATGTAAGAGGGTTTATTGAGTATTTTAATTGCAATGCAAATTTAAATTCAGAAAAATAAATGTAGTGTAAATTTAAAATATAAAACTATTGCAAAAAGGGAAAAAAATCTAGATAGCTGAAATCTTAGCTAGATATTCGGAATATTATTGCATGGAAATACTAATGTTTCTATCCTTTACGCTAAAATGAAAATTGTGTTCTGAGCATATGAAAAGAAAGTGGTTATTTTTGTGTTAGCAGCACTTCTTCA

Network for GWHGAAEX013195

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	6	68	4.70E-24
PF14308.5	DnaJ-X	133	321	9.70E-46

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	106.000
SRP064423	SRR2545915	Juvenile tuber	61.790
SRP108465	SRR5643513	five period of Gastrodia elata	59.230
	SRR5643514	five period of Gastrodia elata	49.380
	SRR5643515	five period of Gastrodia elata	68.080
	SRR5643524	five period of Gastrodia elata	67.080
	SRR5643525	five period of Gastrodia elata	78.720
	SRR5643528	five period of Gastrodia elata	105.500
	SRR5643658	five period of Gastrodia elata	75.700
	SRR5643659	five period of Gastrodia elata	58.500
	SRR5643660	five period of Gastrodia elata	58.670
	SRR5643661	five period of Gastrodia elata	71.410
	SRR5643662	five period of Gastrodia elata	60.330
	SRR5643663	five period of Gastrodia elata	44.060
	SRR5643664	five period of Gastrodia elata	42.080
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	57.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	58.710
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	50.410
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	68.470
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	74.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	86.990
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	67.540
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	67.220
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	43.700
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	56.850
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	40.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	40.960
SRP279888	Gastro	Gastrodia elata tuber	62.48
	Juven	Juvenile tuber	137.03
	Mother_Gastro	Mother tuber of Gastrodia elata	131.63
	Mother_Juven	Mother tuber of Juvenile	153.33