Detail information of GWHGAAEX013202/evm.TU.scaffold_5.125
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|347754382|ref|YP_004861946.1| | 1.00E-31 | protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B] |
| KOG | KOG0595 | 2.00E-84 | Serine/threonine-protein kinase involved in autophagy |
| nr | gi|672124792|ref|XP_008785793.1| | 6.60E-132 | PREDICTED: serine/threonine-protein kinase ULK3 [Phoenix dactylifera] |
| Swissprot | tr|Q93VD3|CIPKN_ARATH | 5.00E-39 | CBL-interacting serine/threonine-protein kinase 23 |
| trEMBL | tr|M0SUN3|M0SUN3_MUSAM | 6.00E-120 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P01040_001} |
| TAIR | AT1G49180_1 | 2.00E-84 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000016 | 2221571 | 2247852 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013202
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03227.15 | GILT | 34 | 135 | 7.40E-28 |
| PF00069.24 | Pkinase | 239 | 483 | 2.40E-61 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | Group-Pl-3 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 16.360 |
| SRR2545915 | Juvenile tuber | 14.220 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.440 |
| SRR5643514 | five period of Gastrodia elata | 22.070 | |
| SRR5643515 | five period of Gastrodia elata | 21.550 | |
| SRR5643524 | five period of Gastrodia elata | 23.780 | |
| SRR5643525 | five period of Gastrodia elata | 30.500 | |
| SRR5643528 | five period of Gastrodia elata | 30.330 | |
| SRR5643658 | five period of Gastrodia elata | 34.450 | |
| SRR5643659 | five period of Gastrodia elata | 16.350 | |
| SRR5643660 | five period of Gastrodia elata | 15.930 | |
| SRR5643661 | five period of Gastrodia elata | 13.340 | |
| SRR5643662 | five period of Gastrodia elata | 15.730 | |
| SRR5643663 | five period of Gastrodia elata | 14.950 | |
| SRR5643664 | five period of Gastrodia elata | 12.870 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 12.410 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.050 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.550 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 10.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.500 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.360 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.260 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.510 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 15.170 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.690 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 19.360 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 19.360 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.05 |
| Juven | Juvenile tuber | 8.63 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 46.59 | |
| Mother_Juven | Mother tuber of Juvenile | 21.12 |