Gene detail

Detail information of GWHGAAEX013211/evm.TU.scaffold_5.134

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000016	2495124	2496689	-

Transcript Sequence
>GWHTAAEX013211 CGACAAGCTATCTATACGCTACCCATGCCCTAATCCCTGTTCGCACGACCGAGCCCTATCCTTCTCCTTTGAACGGTGCATGGATGATGTTGCTCGCCTCGATCGAGCGGCCGATCCTTCGAGAGGTGGATCGCAGCCTGAAGCGACGCGTGGCTCGCACCGTGGGTGGGTGCCAATAGGAAGCCTCGTGAGGATTGGATCGCCAATAACCTCACCCAATCGCATCCATACCCTTCGAGTCCTTAAAAGGGAAAGTACCGAGTTCGTGAAGCAAGGGGGGAAGCATTGAAACTGAAGTCCTTGCAAGCTCGGTGCCGAAGTCTAGGATCGACCTCGCGACGCGCAAGCAGGTACTCCACTCGATTTCTTATCCAGTATAATTTTTATGAAATCATCTTGAAAGATTTATAAGATTCATAGATAACTTTGTGATGGATCCTTCATTTAAGCTCTTATTATGTTAGAATGGAAAGTGTAGCGATATGATAATTTAGAATACCTAATATAAGCTTATAGGTGCTCATATACAGGCAAATGTACAAGGCAAAGTGTGTATAATATTAAAGTAGTTCATTAGTAATCTGAATGGCTTGCTGTATTTAGTAATCCACTGATTTGTATCTTTGTAATTAATGCTCTAGATTCTTAACTAATTTTTACCATTGTACAGAGTTGTTCTACTTGTAATATTTTATTATCCCATGCGTTAATTGGAATTCATGGTTATATCGGCAGGAATTTCGATATTTTACACTCCTATTTAATTATCTACCTGTTATGATAATTAAATAATGTTTTTAAATATTACATGTCGTATGAACTTGAGAGTTGGGCAATAAAGCAAGATTATTACAGCATTAGTAAAGCTAATATAAGTCATGCCGCATGTTGCTATACTTTTATCTTTTTCTTAACTATTGATCACTTGCGAATGTTCAGGTTGCGTTCATATAAATGACATTTAAGCTTCTTTAATTATTACTGTTCTATTTATGAAAAATTGGATGCATATATAAATCGAAAATGATACTTCTAGGACTTGTCTCTAGGTAATTGCTTATGCCTTCAATGCAAAAATGTTATAGTTATATCAATAGTTCAATACATTTATCATATTTTGAAAAGACAACAATACATTTTTTAAGACTAATTTTTATCTAGAGAATTTCTTATGAATTTAATTCAAAGTACGAATACCATGTGTTCTTTCAAAAGTTATGTTAAGAATTAAAAATTAATTGACGAAATAGTTCTACAATAATAGTTTTTCACCATTTCTTAAAAAAACACCAATGATGTTCCATATAATGTACAATATAATGTGATGATGAAATTAAATTGCAGCATATGAGTTCAAAGTATTTATGCATTGGAGGTGAGGATGTATATGAAAAATTTCCTTGAAAATGGAAGAAGAGAATGGAAGTATACTGCTGCTTTCTTCTTATAAAATTGTTGTTCTCTTCTAGGTTATCTATGAGCTAATTGATTTCTTAATATTTTATTGACCCGTGAACATATTGAAGTTTCTTTTTTAGGAGATAGATGTATTGTTCTATATATAAG

Network for GWHGAAEX013211

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.990
SRP064423	SRR2545915	Juvenile tuber	7.760
SRP108465	SRR5643513	five period of Gastrodia elata	9.480
	SRR5643514	five period of Gastrodia elata	12.110
	SRR5643515	five period of Gastrodia elata	10.250
	SRR5643524	five period of Gastrodia elata	12.450
	SRR5643525	five period of Gastrodia elata	19.690
	SRR5643528	five period of Gastrodia elata	19.880
	SRR5643658	five period of Gastrodia elata	20.150
	SRR5643659	five period of Gastrodia elata	9.250
	SRR5643660	five period of Gastrodia elata	9.700
	SRR5643661	five period of Gastrodia elata	10.730
	SRR5643662	five period of Gastrodia elata	10.900
	SRR5643663	five period of Gastrodia elata	13.000
	SRR5643664	five period of Gastrodia elata	12.540
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.200
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.190
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.960
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.750
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.760
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.760
SRP279888	Gastro	Gastrodia elata tuber	11.06
	Juven	Juvenile tuber	20.11
	Mother_Gastro	Mother tuber of Gastrodia elata	25.12
	Mother_Juven	Mother tuber of Juvenile	23.85