Detail information of GWHGAAEX013223/evm.TU.scaffold_5.146


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15599386|ref|NP_252880.1|9.00E-31iron/ascorbate oxidoreductase [Pseudomonas aeruginosa PAO1]
KOGKOG01432.00E-151Iron/ascorbate family oxidoreductases
nrgi|743781306|ref|XP_010920852.1|9.22E-169PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like isoform X4 [Elaeis guineensis]
Swissprottr|D4N501|DIOX2_PAPSO5.00E-78Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase
trEMBLtr|W5ABE8|W5ABE8_WHEAT7.00E-157Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_1BS_CE840DC06.1}
TAIRAT3G111802.00E-1512-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001627892082792255+
Transcript Sequence

Network for GWHGAAEX013223

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14226.5DIOX_N451473.60E-23
PF03171.192OG-FeII_Oxy1962942.60E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.050
SRR2545915Juvenile tuber3.810
SRP108465SRR5643513five period of Gastrodia elata33.440
SRR5643514five period of Gastrodia elata44.730
SRR5643515five period of Gastrodia elata52.110
SRR5643524five period of Gastrodia elata62.650
SRR5643525five period of Gastrodia elata64.910
SRR5643528five period of Gastrodia elata31.910
SRR5643658five period of Gastrodia elata63.550
SRR5643659five period of Gastrodia elata12.920
SRR5643660five period of Gastrodia elata5.200
SRR5643661five period of Gastrodia elata18.630
SRR5643662five period of Gastrodia elata16.220
SRR5643663five period of Gastrodia elata5.900
SRR5643664five period of Gastrodia elata10.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.510
SRR6049655Rhizomagastrodiae_C368-T10_good_110.670
SRR6049656Rhizomagastrodiae_C368-T07_good_117.630
SRR6049657Rhizomagastrodiae_C368-T07_good_120.850
SRR6049658Rhizomagastrodiae_C368-T04_good_130.020
SRR6049659Rhizomagastrodiae_C368-T04_good_137.770
SRR6049660Rhizomagastrodiae_C368-T01_good_124.800
SRR6049661Rhizomagastrodiae_C368-T04_good_128.000
SRR6049662Rhizomagastrodiae_C368-T01_good_125.400
SRR6049663Rhizomagastrodiae_C368-T01_good_138.680
SRR6049664Rhizomagastrodiae_C368-T10_good_111.710
SRR6049665Rhizomagastrodiae_C368-T10_good_111.710
SRP279888GastroGastrodia elata tuber 22.17
JuvenJuvenile tuber34.61
Mother_GastroMother tuber of Gastrodia elata 78.93
Mother_JuvenMother tuber of Juvenile 39.03