Gene detail

Detail information of GWHGAAEX013225/evm.TU.scaffold_5.148

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672130975\|ref\|XP_008789038.1\|	6.19E-38	PREDICTED: uncharacterized protein LOC103706647 isoform X3 [Phoenix dactylifera]
trEMBL	tr\|M0RKL9\|M0RKL9_MUSAM	9.00E-32	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P22940_001}
TAIR	AT3G53320	4.00E-18	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000016	2798365	2810584	-

Transcript Sequence
>GWHTAAEX013225 GTTTGCTCTGAATTTCAAATATTTAACCCTTGCTTTGCGCTCGTTTCCGCCTCCTCGCTCTTCGTAACGCAAGCGCGGCAGCGGGCCTCATTGATCCCTCCTCGCCGGAGAACTTCACCGGCGATTCGTCGGAGAGAAGAATCGGCATGGAGTGCGTTTCCCTCATTGATATTTCTTTGGAGGATGATCTCCTCTTCATCCCGTCTTCATCGCATGAACTCGGATCTGATGAGGCATTTAGTAATCTGGAAGATGAAATTACAGAGAATGTGAGCTTGGAAACAGAAAAAGTGGTCAAACTTTCTGAATCTCCTCAGCAAAAGCGTGGAAGATCTGAGCGGTTCAGTTTGCGCAAAAGTTTAGCTTGGGATAGTGCATTTTTCACAAGTGAAGGTGTGCTAAACCCTGAGGAACTGTCGATCATCAACTGTGCTTATAGCAAGGCTGTAGAATTTACTTTACCCGGAATTTATGAGGGAAGTAATTCTACCGAGTCAACTTCTTCATTAGATGGTGAAAGTCAACCACTGGAACGTCTCGAACTTTGCTTATTTGAGAATCTTCGAGCTTCAATTAAAAGTCCAATGGTTGACTCAAATCAAAACGGCAATATGATGCGCTCTGGTAAAACCAAGTTGAAACCCCTGGCTTCATTGAAAAAGCATGGCTGCATCAAGAAAAAACAGGAGAGCTCATTGCATGATGGTTCTGTTGTTACAAAAGTGGCTGCATCTGGGCTTAAAAAACCGAGTTCAAATAAGCCGCCAAAAGTTTCATCAGCCACTCCATCCTCAGTACAAAGAAAAATGACTGCTTTAGAGAACATCCAAATTAAAAGCAGCAAAAGCAAGCTTTTGCCAGGAACCGCGGCAAAACAGCTCCCTGTTATTTCCCTTAATAAAGCAAATAGTAAAGTCTGCCCGCCTCAACCCGGCCTTAAATCTGCAGCACCTTCATGCTTGTCGTCCAGCCGCCCGGCGAGCAGCTCATCAAATTCAAGCTGTTCATCTTCTTTAGCGACAAGGAGGAATGCTGCGGCTAAACAGCCCCCAGTTATTTCCCTTAATAAAGCAAATAATAATCTCTGCACGCGACAACCTGGCCTTAAATCGGCAGCATCTTCATGCTTGTCATCCAGCCGCTCGGCGAGCAGCTCATCCGATTCAAGCTTTTCATCTTCTTTGGCGACTAGGAGGAATGCCGCCGGAAACACTGCTATCCGATCATCCTGCAATTTTTCTCGTAAAATTCCGGCAAAGATCACGAGAAGCAGACCCGGATCAATGAGTGAAATCTTTGATTCGAGCTCAGTGAAGCCCTCCTCACTGCTCTCAACGTCCTCTCCCCGCAGTTCTATCTGCAGCACTCCTTCAGAGTCTTCTTCTCGGACACCCAGAGCTTCAAGTATCTTCTCCCAAAATAGCGCGTTGTCCCAGCCACACTTTGGGGGAGATCATATAAAACTCGCCCTACAATTTGATTCTGGCACCAGACGGCTTAGGATGCCGAGGCCGAGGATCGGTTTCTTTGATAAGGAGAAAACTAGCTCGAGCAGTTTAACAAAGAGCATTGGAACAAAACACATCAGCAACCTTCCGAGTGCGCTGAACCGGGTATTGGGACACCCTAAAACCGTCGAAGCCGAGCGTGAATCAGCGCGCGATCCGAGCGTAAAGACGCGCCTGAATTTGCTGCAGCCCAAGCTTTTTGCGACTGCGAATGGAACACGGGCGAACGGGGGAGCGAAGAGCCTTCTGCGGGCGCAGCAACTTGAGGTGAGTTCTGTCAATAATGGCGAAGAGAAGGAGAATCTCAGCCCCCTTTTTGAATCAGAAAGAACTCACAATAACAAACCAAGGCTTTGCTGAAGCCTGAAGATAAATACTGCACTGTAACCCTGCTGGAGGAAATGGTTACTTCGGTAAAATCATGACCAGATTCTCATATTATATATATAAGAAATATCATCATTCTTTTTTGTATCTCTTATGATTCATTAAGAAATTTTAATGAATAAAGTGTTGGGTTATGTGCTTGAAAAGTGCCTTTGAATTTTTGTGAAAAATAGGAATATTTGTATATCCAAGTTTGTTCAATTAAGAAAAAGTTACAGAGTTATTTGACATCGTTGAAGC

Network for GWHGAAEX013225

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.820
SRP064423	SRR2545915	Juvenile tuber	0.520
SRP108465	SRR5643513	five period of Gastrodia elata	2.890
	SRR5643514	five period of Gastrodia elata	1.450
	SRR5643515	five period of Gastrodia elata	4.850
	SRR5643524	five period of Gastrodia elata	1.950
	SRR5643525	five period of Gastrodia elata	1.890
	SRR5643528	five period of Gastrodia elata	5.390
	SRR5643658	five period of Gastrodia elata	3.060
	SRR5643659	five period of Gastrodia elata	2.250
	SRR5643660	five period of Gastrodia elata	2.120
	SRR5643661	five period of Gastrodia elata	2.390
	SRR5643662	five period of Gastrodia elata	2.500
	SRR5643663	five period of Gastrodia elata	2.070
	SRR5643664	five period of Gastrodia elata	2.210
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.580
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.040
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.160
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.180
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.320
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.580
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.720
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.160
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.490
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.890
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.890
SRP279888	Gastro	Gastrodia elata tuber	1.97
	Juven	Juvenile tuber	1.17
	Mother_Gastro	Mother tuber of Gastrodia elata	4.59
	Mother_Juven	Mother tuber of Juvenile	3.70