Detail information of GWHGAAEX013230/evm.TU.scaffold_5.153
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|333910016|ref|YP_004483749.1| | 3.00E-22 | serine/threonine protein kinase [Methanotorris igneus Kol 5] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|568632103|gb|AGI60283.1| | 0 | mitogen-activated protein kinase 4 [Dendrobium catenatum] |
| Swissprot | tr|Q10N20|MPK5_ORYSJ | 0 | Mitogen-activated protein kinase 5 |
| trEMBL | tr|M0TCA4|M0TCA4_MUSAM | 0 | Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165} |
| TAIR | AT3G45640 | 0 | mitogen-activated protein kinase 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000016 | 2886810 | 2908496 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013230
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 41 | 322 | 2.10E-74 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K20536 | MPK3 | MAPK signaling pathway - plant | map04016 |
| Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0004707 | Molecular Function | MAP kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 31.630 |
| SRR2545915 | Juvenile tuber | 30.100 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 19.920 |
| SRR5643514 | five period of Gastrodia elata | 14.160 | |
| SRR5643515 | five period of Gastrodia elata | 53.800 | |
| SRR5643524 | five period of Gastrodia elata | 23.750 | |
| SRR5643525 | five period of Gastrodia elata | 51.530 | |
| SRR5643528 | five period of Gastrodia elata | 149.830 | |
| SRR5643658 | five period of Gastrodia elata | 44.330 | |
| SRR5643659 | five period of Gastrodia elata | 46.380 | |
| SRR5643660 | five period of Gastrodia elata | 25.270 | |
| SRR5643661 | five period of Gastrodia elata | 45.860 | |
| SRR5643662 | five period of Gastrodia elata | 49.350 | |
| SRR5643663 | five period of Gastrodia elata | 38.260 | |
| SRR5643664 | five period of Gastrodia elata | 40.370 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.880 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.590 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.530 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.930 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 12.540 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.920 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 12.420 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 15.790 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.320 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 18.410 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 18.410 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.71 |
| Juven | Juvenile tuber | 8.88 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 58.16 | |
| Mother_Juven | Mother tuber of Juvenile | 89.17 |