Detail information of GWHGAAEX013231/evm.TU.scaffold_5.154


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07241.00E-68Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
nrgi|514074431|gb|AGO33167.1|1.22E-109MYB transcription factor [Narcissus tazetta var. chinensis]
Swissprottr|Q8RWU3|RVE8_ARATH4.00E-83Protein REVEILLE 8
trEMBLtr|R9YZ62|R9YZ62_NARTA5.00E-110MYB transcription factor {ECO:0000313|EMBL:AGO33167.1}
TAIRAT5G028401.00E-68LHY/CCA1-like 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001629177272959951+
Transcript Sequence

Network for GWHGAAEX013231

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding20645.90E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.090
SRR2545915Juvenile tuber28.060
SRP108465SRR5643513five period of Gastrodia elata24.600
SRR5643514five period of Gastrodia elata23.260
SRR5643515five period of Gastrodia elata28.400
SRR5643524five period of Gastrodia elata24.440
SRR5643525five period of Gastrodia elata15.980
SRR5643528five period of Gastrodia elata11.710
SRR5643658five period of Gastrodia elata13.080
SRR5643659five period of Gastrodia elata13.470
SRR5643660five period of Gastrodia elata16.650
SRR5643661five period of Gastrodia elata12.430
SRR5643662five period of Gastrodia elata10.720
SRR5643663five period of Gastrodia elata14.430
SRR5643664five period of Gastrodia elata12.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.190
SRR6049655Rhizomagastrodiae_C368-T10_good_126.560
SRR6049656Rhizomagastrodiae_C368-T07_good_119.510
SRR6049657Rhizomagastrodiae_C368-T07_good_134.190
SRR6049658Rhizomagastrodiae_C368-T04_good_127.950
SRR6049659Rhizomagastrodiae_C368-T04_good_128.170
SRR6049660Rhizomagastrodiae_C368-T01_good_121.980
SRR6049661Rhizomagastrodiae_C368-T04_good_124.890
SRR6049662Rhizomagastrodiae_C368-T01_good_115.280
SRR6049663Rhizomagastrodiae_C368-T01_good_117.830
SRR6049664Rhizomagastrodiae_C368-T10_good_117.640
SRR6049665Rhizomagastrodiae_C368-T10_good_117.640
SRP279888GastroGastrodia elata tuber 52.97
JuvenJuvenile tuber49.46
Mother_GastroMother tuber of Gastrodia elata 68.90
Mother_JuvenMother tuber of Juvenile 92.84