Detail information of GWHGAAEX013245/evm.TU.scaffold_5.168


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383765465|ref|YP_005444446.1|3.00E-133aspartate-semialdehyde dehydrogenase [Phycisphaera mikurensis NBRC 102666]
KOGKOG47770Aspartate-semialdehyde dehydrogenase
nrgi|743862043|ref|XP_010943439.1|0PREDICTED: probable aspartate-semialdehyde dehydrogenase isoform X1 [Elaeis guineensis]
trEMBLtr|V7CQR2|V7CQR2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW32454.1}
TAIRAT1G148100semialdehyde dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001631877603204312-
Transcript Sequence

Network for GWHGAAEX013245

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01118.23Semialdhyde_dh461589.00E-31
PF02774.17Semialdhyde_dhC1883687.30E-44
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00133asd Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Pyrimidine metabolismmap00240
Cysteine and methionine metabolismmap00270
Lysine biosynthesismap00300
Monobactam biosynthesismap00261

Gene Ontology

GO term OntologyName
GO:0009097Biological Processisoleucine biosynthetic process
GO:0008652Biological Processcellular amino acid biosynthetic process
GO:0009089Biological Processlysine biosynthetic process via diaminopimelate
GO:0009088Biological Processthreonine biosynthetic process
GO:0009086Biological Processmethionine biosynthetic process
GO:0055114Biological Processoxidation-reduction process
GO:0051287Molecular FunctionNAD binding
GO:0050661Molecular FunctionNADP binding
GO:0046983Molecular Functionprotein dimerization activity
GO:0004073Molecular Functionaspartate-semialdehyde dehydrogenase activity
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.650
SRR2545915Juvenile tuber3.620
SRP108465SRR5643513five period of Gastrodia elata6.020
SRR5643514five period of Gastrodia elata5.320
SRR5643515five period of Gastrodia elata6.060
SRR5643524five period of Gastrodia elata5.300
SRR5643525five period of Gastrodia elata5.160
SRR5643528five period of Gastrodia elata5.910
SRR5643658five period of Gastrodia elata4.930
SRR5643659five period of Gastrodia elata5.580
SRR5643660five period of Gastrodia elata7.100
SRR5643661five period of Gastrodia elata7.200
SRR5643662five period of Gastrodia elata9.740
SRR5643663five period of Gastrodia elata7.150
SRR5643664five period of Gastrodia elata6.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.810
SRR6049655Rhizomagastrodiae_C368-T10_good_112.520
SRR6049656Rhizomagastrodiae_C368-T07_good_18.400
SRR6049657Rhizomagastrodiae_C368-T07_good_17.380
SRR6049658Rhizomagastrodiae_C368-T04_good_17.380
SRR6049659Rhizomagastrodiae_C368-T04_good_17.070
SRR6049660Rhizomagastrodiae_C368-T01_good_18.260
SRR6049661Rhizomagastrodiae_C368-T04_good_17.150
SRR6049662Rhizomagastrodiae_C368-T01_good_110.290
SRR6049663Rhizomagastrodiae_C368-T01_good_19.070
SRR6049664Rhizomagastrodiae_C368-T10_good_17.890
SRR6049665Rhizomagastrodiae_C368-T10_good_17.890
SRP279888GastroGastrodia elata tuber 9.58
JuvenJuvenile tuber7.28
Mother_GastroMother tuber of Gastrodia elata 6.84
Mother_JuvenMother tuber of Juvenile 6.96