Detail information of GWHGAAEX013273/evm.TU.scaffold_5.201


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10302.00E-75Predicted Ca2+-dependent phospholipid-binding protein
nrgi|743845475|ref|XP_010938593.1|9.97E-174PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 isoform X1 [Elaeis guineensis]
Swissprottr|Q8L7A4|AGD11_ARATH1.00E-143Probable ADP-ribosylation factor GTPase-activating protein AGD11
trEMBLtr|M0SYZ7|M0SYZ7_MUSAM4.00E-170Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P16180_001}
TAIRAT3G07940_22.00E-75Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001638934563926569+
Transcript Sequence

Network for GWHGAAEX013273

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01412.17ArfGap211351.10E-36
PF00168.29C22082972.50E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12486SMAP Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0005096Molecular FunctionGTPase activator activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.110
SRR2545915Juvenile tuber30.910
SRP108465SRR5643513five period of Gastrodia elata19.620
SRR5643514five period of Gastrodia elata14.400
SRR5643515five period of Gastrodia elata19.910
SRR5643524five period of Gastrodia elata17.840
SRR5643525five period of Gastrodia elata84.190
SRR5643528five period of Gastrodia elata76.940
SRR5643658five period of Gastrodia elata61.040
SRR5643659five period of Gastrodia elata23.860
SRR5643660five period of Gastrodia elata24.980
SRR5643661five period of Gastrodia elata22.740
SRR5643662five period of Gastrodia elata30.780
SRR5643663five period of Gastrodia elata23.360
SRR5643664five period of Gastrodia elata26.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.480
SRR6049655Rhizomagastrodiae_C368-T10_good_121.190
SRR6049656Rhizomagastrodiae_C368-T07_good_115.630
SRR6049657Rhizomagastrodiae_C368-T07_good_116.890
SRR6049658Rhizomagastrodiae_C368-T04_good_115.780
SRR6049659Rhizomagastrodiae_C368-T04_good_116.670
SRR6049660Rhizomagastrodiae_C368-T01_good_115.270
SRR6049661Rhizomagastrodiae_C368-T04_good_115.430
SRR6049662Rhizomagastrodiae_C368-T01_good_111.780
SRR6049663Rhizomagastrodiae_C368-T01_good_115.050
SRR6049664Rhizomagastrodiae_C368-T10_good_117.290
SRR6049665Rhizomagastrodiae_C368-T10_good_117.290
SRP279888GastroGastrodia elata tuber 36.02
JuvenJuvenile tuber18.17
Mother_GastroMother tuber of Gastrodia elata 41.84
Mother_JuvenMother tuber of Juvenile 23.39