Detail information of GWHGAAEX013279/evm.TU.scaffold_5.208


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00271.00E-27Calmodulin and related proteins (EF-Hand superfamily)
nrgi|672132044|ref|XP_008789596.1|2.43E-33PREDICTED: probable calcium-binding protein CML36 [Phoenix dactylifera]
Swissprottr|Q9SS31|CML36_ARATH4.00E-28Probable calcium-binding protein CML36
trEMBLtr|T2C5E7|T2C5E7_BRAJU1.00E-29Calmodulin-like protein {ECO:0000313|EMBL:AGV22098.1}
TAIRAT3G101901.00E-27Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001641099284110729+
Transcript Sequence

Network for GWHGAAEX013279

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_7931551.10E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13448CML Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.070
SRR2545915Juvenile tuber5.690
SRP108465SRR5643513five period of Gastrodia elata5.800
SRR5643514five period of Gastrodia elata25.690
SRR5643515five period of Gastrodia elata9.110
SRR5643524five period of Gastrodia elata38.560
SRR5643525five period of Gastrodia elata8.530
SRR5643528five period of Gastrodia elata7.340
SRR5643658five period of Gastrodia elata2.770
SRR5643659five period of Gastrodia elata23.480
SRR5643660five period of Gastrodia elata38.940
SRR5643661five period of Gastrodia elata15.290
SRR5643662five period of Gastrodia elata9.850
SRR5643663five period of Gastrodia elata8.390
SRR5643664five period of Gastrodia elata19.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.850
SRR6049655Rhizomagastrodiae_C368-T10_good_194.570
SRR6049656Rhizomagastrodiae_C368-T07_good_138.620
SRR6049657Rhizomagastrodiae_C368-T07_good_116.010
SRR6049658Rhizomagastrodiae_C368-T04_good_123.320
SRR6049659Rhizomagastrodiae_C368-T04_good_126.960
SRR6049660Rhizomagastrodiae_C368-T01_good_118.350
SRR6049661Rhizomagastrodiae_C368-T04_good_116.930
SRR6049662Rhizomagastrodiae_C368-T01_good_137.110
SRR6049663Rhizomagastrodiae_C368-T01_good_135.270
SRR6049664Rhizomagastrodiae_C368-T10_good_166.860
SRR6049665Rhizomagastrodiae_C368-T10_good_166.860
SRP279888GastroGastrodia elata tuber 8.77
JuvenJuvenile tuber2.38
Mother_GastroMother tuber of Gastrodia elata 13.90
Mother_JuvenMother tuber of Juvenile 3.50