Detail information of GWHGAAEX013280/evm.TU.scaffold_5.209


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|403509238|ref|YP_006640876.1|3.00E-06EF-hand domain protein [Nocardiopsis alba ATCC BAA-2165]
KOGKOG00275.00E-44Calmodulin and related proteins (EF-Hand superfamily)
nrgi|695041775|ref|XP_009408507.1|7.59E-45PREDICTED: calmodulin-like protein 11 [Musa acuminata subsp. malaccensis]
Swissprottr|Q7DMN9|CALM5_SOLTU1.00E-44Calmodulin-5/6/7/8
trEMBLtr|M0TDS9|M0TDS9_MUSAM3.00E-45Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P01390_001}
TAIRAT5G377805.00E-44calmodulin 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001641159054118092-
Transcript Sequence

Network for GWHGAAEX013280

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13833.5EF-hand_827750.024
PF13499.5EF-hand_7861481.30E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.250
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata6.910
SRR5643514five period of Gastrodia elata18.870
SRR5643515five period of Gastrodia elata15.520
SRR5643524five period of Gastrodia elata15.360
SRR5643525five period of Gastrodia elata0.140
SRR5643528five period of Gastrodia elata0.410
SRR5643658five period of Gastrodia elata0.100
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.120
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.950
SRR6049655Rhizomagastrodiae_C368-T10_good_16.370
SRR6049656Rhizomagastrodiae_C368-T07_good_12.940
SRR6049657Rhizomagastrodiae_C368-T07_good_14.680
SRR6049658Rhizomagastrodiae_C368-T04_good_10.720
SRR6049659Rhizomagastrodiae_C368-T04_good_11.280
SRR6049660Rhizomagastrodiae_C368-T01_good_11.690
SRR6049661Rhizomagastrodiae_C368-T04_good_10.130
SRR6049662Rhizomagastrodiae_C368-T01_good_11.370
SRR6049663Rhizomagastrodiae_C368-T01_good_11.150
SRR6049664Rhizomagastrodiae_C368-T10_good_115.450
SRR6049665Rhizomagastrodiae_C368-T10_good_115.450
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.94
Mother_JuvenMother tuber of Juvenile 0.14