Detail information of GWHGAAEX013296/evm.TU.scaffold_5.232
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0082 | 0 | G-protein alpha subunit (small G protein superfamily) |
| nr | gi|672186842|ref|XP_008813184.1| | 0 | PREDICTED: extra-large guanine nucleotide-binding protein 1-like isoform X2 [Phoenix dactylifera] |
| Swissprot | tr|O80462|XLG1_ARATH | 0 | Extra-large guanine nucleotide-binding protein 1 |
| trEMBL | tr|M0SU01|M0SU01_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P32390_001} |
| TAIR | AT2G23460 | 0 | extra-large G-protein 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000016 | 4804232 | 4842005 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013296
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00503.19 | G-alpha | 454 | 840 | 4.00E-53 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0007165 | Biological Process | signal transduction |
| GO:0007186 | Biological Process | G-protein coupled receptor signaling pathway |
| GO:0003924 | Molecular Function | GTPase activity |
| GO:0019001 | Molecular Function | guanyl nucleotide binding |
| GO:0031683 | Molecular Function | G-protein beta/gamma-subunit complex binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 52.970 |
| SRR2545915 | Juvenile tuber | 43.750 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 42.880 |
| SRR5643514 | five period of Gastrodia elata | 35.370 | |
| SRR5643515 | five period of Gastrodia elata | 35.790 | |
| SRR5643524 | five period of Gastrodia elata | 35.460 | |
| SRR5643525 | five period of Gastrodia elata | 43.960 | |
| SRR5643528 | five period of Gastrodia elata | 34.150 | |
| SRR5643658 | five period of Gastrodia elata | 65.210 | |
| SRR5643659 | five period of Gastrodia elata | 30.980 | |
| SRR5643660 | five period of Gastrodia elata | 40.490 | |
| SRR5643661 | five period of Gastrodia elata | 33.020 | |
| SRR5643662 | five period of Gastrodia elata | 37.990 | |
| SRR5643663 | five period of Gastrodia elata | 34.610 | |
| SRR5643664 | five period of Gastrodia elata | 46.750 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 64.740 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 63.980 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 49.130 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 89.100 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 88.730 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 119.550 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 75.230 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 82.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 41.070 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 49.280 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 38.190 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 38.190 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 46.27 |
| Juven | Juvenile tuber | 76.16 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 46.92 | |
| Mother_Juven | Mother tuber of Juvenile | 59.46 |