Detail information of GWHGAAEX013305/evm.TU.scaffold_5.241


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695020415|ref|XP_009397256.1|5.11E-51PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FZ86|PDCB3_ARATH7.00E-42PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (Precursor)
trEMBLtr|M0SU41|M0SU41_MUSAM2.00E-51Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P32790_001}
TAIRAT1G186502.00E-41plasmodesmata callose-binding protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001649590444981579+
Transcript Sequence

Network for GWHGAAEX013305

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07983.12X822926.10E-23
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM43
Carbohydrate-Active enzymes FamilyCBM43
Carbohydrate-Active enzymes FamilyCBM43

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.130
SRR2545915Juvenile tuber22.130
SRP108465SRR5643513five period of Gastrodia elata25.890
SRR5643514five period of Gastrodia elata29.180
SRR5643515five period of Gastrodia elata28.220
SRR5643524five period of Gastrodia elata24.720
SRR5643525five period of Gastrodia elata96.630
SRR5643528five period of Gastrodia elata46.920
SRR5643658five period of Gastrodia elata53.710
SRR5643659five period of Gastrodia elata27.980
SRR5643660five period of Gastrodia elata28.850
SRR5643661five period of Gastrodia elata37.990
SRR5643662five period of Gastrodia elata29.130
SRR5643663five period of Gastrodia elata25.990
SRR5643664five period of Gastrodia elata31.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.110
SRR6049655Rhizomagastrodiae_C368-T10_good_126.170
SRR6049656Rhizomagastrodiae_C368-T07_good_115.420
SRR6049657Rhizomagastrodiae_C368-T07_good_123.990
SRR6049658Rhizomagastrodiae_C368-T04_good_121.610
SRR6049659Rhizomagastrodiae_C368-T04_good_118.340
SRR6049660Rhizomagastrodiae_C368-T01_good_118.020
SRR6049661Rhizomagastrodiae_C368-T04_good_116.940
SRR6049662Rhizomagastrodiae_C368-T01_good_128.360
SRR6049663Rhizomagastrodiae_C368-T01_good_119.420
SRR6049664Rhizomagastrodiae_C368-T10_good_130.750
SRR6049665Rhizomagastrodiae_C368-T10_good_130.750
SRP279888GastroGastrodia elata tuber 46.42
JuvenJuvenile tuber22.91
Mother_GastroMother tuber of Gastrodia elata 29.77
Mother_JuvenMother tuber of Juvenile 12.13