Detail information of GWHGAAEX013309/evm.TU.scaffold_5.247


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|470177247|ref|YP_007563291.1|2.00E-19putative serine/threonine protein kinase [Ilumatobacter coccineus YM16-304]
KOGKOG05941.00E-167Protein kinase PCTAIRE and related kinases
nrgi|743771142|ref|XP_010915858.1|0PREDICTED: cyclin-dependent kinase F-1-like [Elaeis guineensis]
Swissprottr|O80345|CDKF1_ARATH3.00E-168Cyclin-dependent kinase F-1
trEMBLtr|A0A061GMJ7|A0A061GMJ7_THECC0CDK-activating kinase 1AT {ECO:0000313|EMBL:EOY30736.1}
TAIRAT4G289801.00E-167CDK-activating kinase 1AT

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001651249125147957-
Transcript Sequence

Network for GWHGAAEX013309

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase241853.00E-37
PF00069.24Pkinase2563891.10E-17
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_CDK-CCRK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.490
SRR2545915Juvenile tuber18.180
SRP108465SRR5643513five period of Gastrodia elata12.130
SRR5643514five period of Gastrodia elata11.480
SRR5643515five period of Gastrodia elata11.270
SRR5643524five period of Gastrodia elata11.910
SRR5643525five period of Gastrodia elata13.460
SRR5643528five period of Gastrodia elata17.620
SRR5643658five period of Gastrodia elata11.780
SRR5643659five period of Gastrodia elata15.420
SRR5643660five period of Gastrodia elata14.410
SRR5643661five period of Gastrodia elata18.710
SRR5643662five period of Gastrodia elata19.910
SRR5643663five period of Gastrodia elata18.270
SRR5643664five period of Gastrodia elata16.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.870
SRR6049655Rhizomagastrodiae_C368-T10_good_114.360
SRR6049656Rhizomagastrodiae_C368-T07_good_116.140
SRR6049657Rhizomagastrodiae_C368-T07_good_111.360
SRR6049658Rhizomagastrodiae_C368-T04_good_110.580
SRR6049659Rhizomagastrodiae_C368-T04_good_111.830
SRR6049660Rhizomagastrodiae_C368-T01_good_19.980
SRR6049661Rhizomagastrodiae_C368-T04_good_114.460
SRR6049662Rhizomagastrodiae_C368-T01_good_116.110
SRR6049663Rhizomagastrodiae_C368-T01_good_115.330
SRR6049664Rhizomagastrodiae_C368-T10_good_117.750
SRR6049665Rhizomagastrodiae_C368-T10_good_117.750
SRP279888GastroGastrodia elata tuber 17.60
JuvenJuvenile tuber12.88
Mother_GastroMother tuber of Gastrodia elata 16.81
Mother_JuvenMother tuber of Juvenile 17.93