Detail information of GWHGAAEX013311/evm.TU.scaffold_5.253
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2329 | 3.00E-64 | Alkaline ceramidase |
| nr | gi|695052874|ref|XP_009414510.1| | 1.02E-80 | PREDICTED: alkaline ceramidase 3-like [Musa acuminata subsp. malaccensis] |
| trEMBL | tr|M0TVU3|M0TVU3_MUSAM | 4.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P33410_001} |
| TAIR | AT4G22330_2 | 3.00E-64 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000016 | 5322225 | 5351098 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013311
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05875.11 | Ceramidase | 68 | 200 | 4.10E-37 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K04711 | ACER3, YDC1 | Metabolic pathways | map01100 |
| Sphingolipid metabolism | map00600 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006672 | Biological Process | ceramide metabolic process |
| GO:0016811 | Molecular Function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.910 |
| SRR2545915 | Juvenile tuber | 18.260 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.470 |
| SRR5643514 | five period of Gastrodia elata | 8.870 | |
| SRR5643515 | five period of Gastrodia elata | 8.280 | |
| SRR5643524 | five period of Gastrodia elata | 10.280 | |
| SRR5643525 | five period of Gastrodia elata | 8.870 | |
| SRR5643528 | five period of Gastrodia elata | 11.620 | |
| SRR5643658 | five period of Gastrodia elata | 6.570 | |
| SRR5643659 | five period of Gastrodia elata | 13.530 | |
| SRR5643660 | five period of Gastrodia elata | 11.890 | |
| SRR5643661 | five period of Gastrodia elata | 11.040 | |
| SRR5643662 | five period of Gastrodia elata | 11.570 | |
| SRR5643663 | five period of Gastrodia elata | 9.510 | |
| SRR5643664 | five period of Gastrodia elata | 11.170 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.640 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.070 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.100 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.360 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.070 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.240 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.310 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.580 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.500 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.500 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.19 |
| Juven | Juvenile tuber | 9.84 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.87 | |
| Mother_Juven | Mother tuber of Juvenile | 6.45 |