Detail information of GWHGAAEX013312/evm.TU.scaffold_5.256


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672145681|ref|XP_008796767.1|0PREDICTED: FRIGIDA-like protein 4a [Phoenix dactylifera]
Swissprottr|Q9LUV4|FRL4A_ARATH4.00E-160FRIGIDA-like protein 4a
trEMBLtr|M0S7G1|M0S7G1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P12700_001}
TAIRAT3G224401.00E-159FRIGIDA-like protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001653914235397969-
Transcript Sequence

Network for GWHGAAEX013312

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07899.10Frigida1103974.20E-90
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms132.890
SRR2545915Juvenile tuber192.500
SRP108465SRR5643513five period of Gastrodia elata140.300
SRR5643514five period of Gastrodia elata133.690
SRR5643515five period of Gastrodia elata117.770
SRR5643524five period of Gastrodia elata132.870
SRR5643525five period of Gastrodia elata116.650
SRR5643528five period of Gastrodia elata67.130
SRR5643658five period of Gastrodia elata94.580
SRR5643659five period of Gastrodia elata143.640
SRR5643660five period of Gastrodia elata163.860
SRR5643661five period of Gastrodia elata137.220
SRR5643662five period of Gastrodia elata124.830
SRR5643663five period of Gastrodia elata114.850
SRR5643664five period of Gastrodia elata165.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1194.360
SRR6049655Rhizomagastrodiae_C368-T10_good_1187.400
SRR6049656Rhizomagastrodiae_C368-T07_good_1147.360
SRR6049657Rhizomagastrodiae_C368-T07_good_1254.100
SRR6049658Rhizomagastrodiae_C368-T04_good_1167.820
SRR6049659Rhizomagastrodiae_C368-T04_good_1218.770
SRR6049660Rhizomagastrodiae_C368-T01_good_1205.080
SRR6049661Rhizomagastrodiae_C368-T04_good_1170.150
SRR6049662Rhizomagastrodiae_C368-T01_good_1127.880
SRR6049663Rhizomagastrodiae_C368-T01_good_1138.460
SRR6049664Rhizomagastrodiae_C368-T10_good_1113.090
SRR6049665Rhizomagastrodiae_C368-T10_good_1113.090
SRP279888GastroGastrodia elata tuber 129.43
JuvenJuvenile tuber233.70
Mother_GastroMother tuber of Gastrodia elata 83.46
Mother_JuvenMother tuber of Juvenile 152.46