Gene detail

Detail information of GWHGAAEX013313/evm.TU.scaffold_5.257

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672145671\|ref\|XP_008796761.1\|	0	PREDICTED: uncharacterized protein LOC103712121 isoform X1 [Phoenix dactylifera]
Swissprot	tr\|F4KBP5\|CHR4_ARATH	2.00E-10	Protein CHROMATIN REMODELING 4 {ECO:0000303\|PubMed:16547115}
trEMBL	tr\|M0SV67\|M0SV67_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P02880_001}
TAIR	AT5G36740	2.00E-158	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000016	5406368	5435258	+

Transcript Sequence
>GWHTAAEX013313 GGAGGATTCTAACCAGTTTCCAGGCCACGCAGTGCGCAGTCAGTCGTTCGTTCGGCCGCCTTTCCTTGTTCAAAGCAAAGTCCGGTGGGCAGATAGAATTCGAGGAGATGGCGCTATAGCGGACGACTGAGCGCCTAAGCAAAGGGATTCTGGATTTTGGCTCGGCAAAATATATTTCAAATATTTCTAACCCTCGTCTTAAAAGCCAAACGCCGCTAAAATCTCCTCCCCCCACTGAGATCCCCTCTCATTTTTATTTCCTACCCCTCCCAAAATTCGTCGTTTTCCTCTCCCGCTCAATCCATTCCCATCGCCTCTCTGTTTTCGGGGTAATCTTGTTTCCAAATCTGATTTATTTTTGTTGCTCCGCGTTTTCGTTTGGATCTAGGGTTTGCTTCACTGTCTTGATCTCAACTCGTGGATGCAGAACTCTGCAATGGGGAAGGATGGGGATTATTCTAACGTTGCTAAAGTATACGAGTCCAAGAAGGAGAAGAAGCGGCGGCGAATGATGAGCAACAACTCCACACCAGAAGAAGTCGTGATTACACCACGAGTGGAGTTCGTTAAGGTGGGAGGTGGCGAGGAGAGCGGGAAGCCGAACAGTGAGCTGGTTAACGGTGGCGGTAGACAGAAGAGGGCGGGAGGAGATGTGCTCAAGAGGAAGTTGGGCAGCGAGGGAAATAGAGGCAAAGTTGTTGGGTCAGGGTTTGATAGCAAGATTAAGGTGATTTGTGTTGATCAATCTGATGGCGAGGATGTAAATGCGGACTCTTTGGATTCTATAGAATACCAATCAGATATGACATTGGGGATTGGAAAGAGCTTGGTGCCTCTGAAGCTTAGTTATAGGAGTGCAGGCAATGTTGAGGAAAATGACCTGGAATCAATGTCCGATGGGAAGAAAAGTATGGGGATTGATGACGATGACATGCTTAGCAGGAAGAAAACCAAAACAGAAGATACGGACTCTGGTGATGAGGAACCTGAAAAGTTTGGAGAAGGTGATGAGATTATGGGCGGCAGGCTCCCAAGGGGCAAACATAATGGTGGAGAGGATTCAAGCAAGAGAAAGCTTCGACATTGCAGGAGAACAAATAGCAAGGCAGAAGCTGTAAGGTGGTTAGGGCGATCCGGTCAGAGAGAACCTCGCAAGACGAAAGATGCTGGATCTGACATTGGCTTGAAAAAAAACAGCGGGGATGGTGGAAGTTTCATTAAGATGTATGGTAAGAATGATGCTTTGAATGCCTTAAAAAGCAGTAAGATGGTTTCTGACGCTGAAAATCTAAATGCTCAACTAAAGGGGAACAGAAACAAAAGGAAATCTAACAAGAAATCAGCCTCCAATGTTAAACTGCACAATAAAGCGGGAAAAACTTGTTCGGAAGATACAAGCAAACTCCTTGTTACTAAAGTATATCATGAAAATGTTTCTCATAAGGGAGACTCAAATAATGTGAATTTATTGCATGGTAACAAGTATGAATTGGCAGCAAAAGGAGACAACTTCAATGAATCAACTGAAAGTCGCAGTGCAGCTAAAAATAGACTTCGGGAACAGATAAAAAGTATTCTTTTTGATGCTGGCTGGAGGGTTGAATTTAGGCCTAGGAGGGGTAGACACTATGAGGATGCTGTCTATGTTTCACCTCAAGGGTCAGGCTATTGGTCAATCACCAAAGCTTATAATGTATATTTGAATCAATTTCGAAGAGCTTGTGATGGCACAGTGTGCTCTGGAAAGCAACAAAAAGCTTCTGCTAGGTTGGATGGTGACTTGAAAGAAGCAAATTCTACAGCTGTTGTCATATCTCCAGATATCTTACATCTACTGAAAAGGACTGTAGTAAATAAAAGAAGAAGCAAAAAGGAACTGGAAGATGCAAAGCATAAGGTTGGAGGTGGCAGGAGAAAAAAAAGGTCCAATCAAATCACTAAAGATAAACGAACTAGAGATGCTGTGGGAGGAACCAGAGCTAAAGATAGTATGAGAAGAGACCGTGCTCTTTTTGCTCGCAGCTTAAACAGGGATGAAGGATTAGAAAAAAGTGATTATGCTCCATATATCTGGAAGCGAACAATTCTTTCATGGATGATAGATTTGGGAGTAGTTCCAACCAATGGAAAAGTGAGGTACATGAACAAGAGGATGACAAGGGCATTGCTGGATGGACGGATTATAAGAGATGGTATTCAATGCAGCTGCTGCAATAATATTTTCACTGTATCAAAGTTTGAGATTCATTCTGGAAGTAAGCTGCATCAGCCATATGAGAATATATACCTGGAGGCATCTGGCCTCTCCCTTTTGCAGTGTCAAATAAAGGCATGGGAAACTCAGGAGTCCAAACAACACCATTTCCTTGATGTTGACGATGATGGCAATGACCCTAACGATGATACATGTGGCATCTGTGGAGATGGTGGTGATCTGATCTGCTGTGATAGCTGTCCTTCTACTTTCCATCTTTGTTGTTTAGGCATTGAGATGCTTCCTTCAGGAGACTGGCACTGTACCAATTGCTCTTGCAAATTTTGTGGTGCAGCACATGATTCTGTATCTCAAGCTGGAAATGCACATAGTGCATTATTCAATTGTTCACAATGTATGCTGAAATTTCATAAAGATTGTGTTCCAGAGGGCGATGCTGTATCTACTGTTCACAGTAGTTCATGCAATGTGTTTTGTGGGCGGAGCTGCAGAAAGGTGTTCAAGAAGTTACAAAAGCTTATTGGGATAAGGAATAAGTTGGAAGCAGGATTTAGCTGGAGTATTGTTCGTCGGTTTGATGACCCTTCCAATTCATTTGTTAGAATGTCTCAGACAGTAGAAAGCAACTCTAAGATTGCCGTTGCTTATGCTGTTATGGACGAGTGCTTTGTCCCTATAATAGATCAGAGAAGTGGCATTAATTTGATTCATAACGTTGTGTATAACTGCTGGTCAAATTTCAATCGGCTGAACTTCAGTGGATTTTATACTTTTATTCTGGAACGAGGTGATGAAATTGTTGGTGCTGCTTCTGTCAGGATACATGATACAAAACTGGCAGAAATGCCTTTCATTGGCACAAGGTGTATGTATAGGCGCCAAGGCATGTGCCGACGACTTTTTCAAGGAATTGAATCTGTGCTCCGTTCTCTTTGCATTAGAAAATTGATAATTCCTGCTATATCTGAACTAGTGGACACATGGACTAATGTTTTTGGCTTCGAGCCACTTGATGTTTCACAAAATAAAGAAGTAAAATATGCAAGTATACTGGTTTTTCCTGGCACTGGCCTGCTGCAGAAGTCTTTGGTAAAAGACTCAGCTAAGAAGACTGCAAATCTTGAACTAGAAAACAATCCCGAAACCCAGATTTTTGCTACGGCAGAAAAAAACTATTCACCTGATGAGCCCATGGACAGCAAAGAATCAAAATGCGACGCAGAAACTGTAAAACCTTACATGCCTGTTTTGGAGCATGGCGATTGTAATTTATTATTATATAAATCTGGATCTCATACTCAATTTTGTAGTTCTTCAGATAACCCTGATGATGTCGAATCAAATGATCTTTTAAGTGTTCTTTCAAGTGATAGCCAGCACCCTGCTTCTGAGTTTCTAGATGGAATTTCTGGCATTGAAGCCTCCGTTATTTCAGAAACGGCTATTACAGATGCAGTTGAAAATTATAATTTTGAGGAAGGTGTGGGTCCTCCAGGCTCTTGGCAGAAAAAGCTTGATGATAAACCTGCTCTTAATGGGGTTGAACATGCTACTTCTAAAAAATGCGAACTTACTGAAGCAGATGATGACACTAAAGTTAGGTACGAAGCTAATGAACTGAATTCAAATGTAAATGAAGAGAGCTTTAAGGTTTCCATGGATGTATCTAGAATTTCTGGAAATGAAGCCTCAGAGTTGAGACGTCCAGCAGATCATTCTAATTCTGAACTGCCTGCTACTGCTGTAGTTGAAAATAACTGTTCTGTGATGGAAGGTGAGGGCAAGCTTGAAGATAAACCATCTCATTCTGGGATCGCACGTGATGCTAGTAAAAAAAAATGCAAACTCATTGAAGCAGACGAAGATAGATCACTTGAAGTTAGCAGCATGATACTTTTGTATGATGCTAATAAACTGAATTCAAATGTAAATGAAGGTGATGAGATGTCCTTGGACGTACCTGGAAAGTCTGGAAATGAACCCTCAGAGTTCAAACTTCAACAAGATCAGTCTAATTTTGAAATGCCTGTTACTGTTTTAAATTTTGAGAACAATGGTGAGTGCCCGCTAAGTTCTTTGCAGAAGAAGATTAAGGATAAACCAGATCTTAATGGGGTAGCACATCTTAATAATTCAAAGAATTGTGAATTTATTGAATCAAATGAAGATAAATGGCATGAAACTAATGATGTGAAAAGTAACAATGGTGCTAATGAACTGAATTCAATGGTAAATGAAGTCAATGTTGATGTGCTCATTGATGCTACAAGACACTTGAATACTTCTCCAGAGAAGTGCTGTTGTTCATCTTCTAGAGTTTGTGAAAGTGGCTCGGAGGCTATTCCATAACCATTTAATAAGAGCACTTTTGTGATGTCTTGAATCACTTCAGAATCAACTGAAATGCAACGTTTAAGCTAATGATTCAGATGCACTTCATCATTTAGCAGTTAGTAATTCTGTTAGAAACACTAATGCCATGGGTGGCGTCAGCTCCTCTCTTGGCATAAATCATACTATTGACGATTCGTTGTACAAAGTCAGAGCATCATCTCCAGATGTAAATCAGCTTCCTTCAGCTACTTCCAATGTTTTGTATTGATTGCCAAGGTATAGTTGTTGAACCTGGTCATGGTTTTGACATACCCTCCATTAATTAGACATCCAAGACTGACATAGGCTTTAGGAGTCTTGGATTTTGTAAAGGCTTGCTACAGTTGTTTTATATAGGTTATCCAACATGCTCTCTTATTTTTATCTGTGACCAATATGAAATGTTGCAAGAATATCAAGTTGGCCAATTTATGTGTTGATTAGTTTTTTTATTAATTAAAAATTTTCTTGATTTGTATTGTTGAAGAGCTGATCCCAAATCAGCATTATAACTCTTGAAGTAGATTAGTGATGTATTTTCGATTTGCGGAGCATCAAGGCTTTATGCATGTTTATGAAGTATAAACCTATTTGCTCAATCAATACGG

Network for GWHGAAEX013313

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF16135.4	Jas	551	622	1.40E-23

Protein Sequence

>GWHPAAEX013313
MQNSAMGKDGDYSNVAKVYESKKEKKRRRMMSNNSTPEEVVITPRVEFVKVGGGEESGKPNSELVNGGGRQKRAGGDVLKRKLGSEGNRGKVVGSGFDSKIKVICVDQSDGEDVNADSLDSIEYQSDMTLGIGKSLVPLKLSYRSAGNVEENDLESMSDGKKSMGIDDDDMLSRKKTKTEDTDSGDEEPEKFGEGDEIMGGRLPRGKHNGGEDSSKRKLRHCRRTNSKAEAVRWLGRSGQREPRKTKDAGSDIGLKKNSGDGGSFIKMYGKNDALNALKSSKMVSDAENLNAQLKGNRNKRKSNKKSASNVKLHNKAGKTCSEDTSKLLVTKVYHENVSHKGDSNNVNLLHGNKYELAAKGDNFNESTESRSAAKNRLREQIKSILFDAGWRVEFRPRRGRHYEDAVYVSPQGSGYWSITKAYNVYLNQFRRACDGTVCSGKQQKASARLDGDLKEANSTAVVISPDILHLLKRTVVNKRRSKKELEDAKHKVGGGRRKKRSNQITKDKRTRDAVGGTRAKDSMRRDRALFARSLNRDEGLEKSDYAPYIWKRTILSWMIDLGVVPTNGKVRYMNKRMTRALLDGRIIRDGIQCSCCNNIFTVSKFEIHSGSKLHQPYENIYLEASGLSLLQCQIKAWETQESKQHHFLDVDDDGNDPNDDTCGICGDGGDLICCDSCPSTFHLCCLGIEMLPSGDWHCTNCSCKFCGAAHDSVSQAGNAHSALFNCSQCMLKFHKDCVPEGDAVSTVHSSSCNVFCGRSCRKVFKKLQKLIGIRNKLEAGFSWSIVRRFDDPSNSFVRMSQTVESNSKIAVAYAVMDECFVPIIDQRSGINLIHNVVYNCWSNFNRLNFSGFYTFILERGDEIVGAASVRIHDTKLAEMPFIGTRCMYRRQGMCRRLFQGIESVLRSLCIRKLIIPAISELVDTWTNVFGFEPLDVSQNKEVKYASILVFPGTGLLQKSLVKDSAKKTANLELENNPETQIFATAEKNYSPDEPMDSKESKCDAETVKPYMPVLEHGDCNLLLYKSGSHTQFCSSSDNPDDVESNDLLSVLSSDSQHPASEFLDGISGIEASVISETAITDAVENYNFEEGVGPPGSWQKKLDDKPALNGVEHATSKKCELTEADDDTKVRYEANELNSNVNEESFKVSMDVSRISGNEASELRRPADHSNSELPATAVVENNCSVMEGEGKLEDKPSHSGIARDASKKKCKLIEADEDRSLEVSSMILLYDANKLNSNVNEGDEMSLDVPGKSGNEPSEFKLQQDQSNFEMPVTVLNFENNGECPLSSLQKKIKDKPDLNGVAHLNNSKNCEFIESNEDKWHETNDVKSNNGANELNSMVNEVNVDVLIDATRHLNTSPEKCCCSSSRVCESGSEAIP

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	Molecular Function	N-acetyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	32.250
SRP064423	SRR2545915	Juvenile tuber	35.150
SRP108465	SRR5643513	five period of Gastrodia elata	14.890
	SRR5643514	five period of Gastrodia elata	10.480
	SRR5643515	five period of Gastrodia elata	14.300
	SRR5643524	five period of Gastrodia elata	13.420
	SRR5643525	five period of Gastrodia elata	11.870
	SRR5643528	five period of Gastrodia elata	12.820
	SRR5643658	five period of Gastrodia elata	12.800
	SRR5643659	five period of Gastrodia elata	22.600
	SRR5643660	five period of Gastrodia elata	25.730
	SRR5643661	five period of Gastrodia elata	21.100
	SRR5643662	five period of Gastrodia elata	18.780
	SRR5643663	five period of Gastrodia elata	20.310
	SRR5643664	five period of Gastrodia elata	21.340
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	22.500
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	18.570
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.360
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	31.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	25.250
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	33.710
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	27.480
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.930
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.480
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	17.130
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.130
SRP279888	Gastro	Gastrodia elata tuber	24.61
	Juven	Juvenile tuber	54.68
	Mother_Gastro	Mother tuber of Gastrodia elata	12.33
	Mother_Juven	Mother tuber of Juvenile	31.08