Detail information of GWHGAAEX013319/evm.TU.scaffold_5.265


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|379729731|ref|YP_005321927.1|2.00E-13peptidase c14 caspase catalytic subunit p20 [Saprospira grandis str. Lewin]
KOGKOG11640Casein kinase (serine/threonine/tyrosine protein kinase)
nrgi|672170632|ref|XP_008805378.1|0PREDICTED: uncharacterized protein LOC103718369 [Phoenix dactylifera]
Swissprottr|P42158|KC1D_ARATH6.00E-57Casein kinase I isoform delta-like
trEMBLtr|M0TS39|M0TS39_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P20360_001}
TAIRAT3G039400Protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001657762625787898-
Transcript Sequence

Network for GWHGAAEX013319

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1553871.30E-16
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCK1_CK1-Pl

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.150
SRR2545915Juvenile tuber18.190
SRP108465SRR5643513five period of Gastrodia elata33.040
SRR5643514five period of Gastrodia elata35.480
SRR5643515five period of Gastrodia elata32.740
SRR5643524five period of Gastrodia elata33.450
SRR5643525five period of Gastrodia elata41.660
SRR5643528five period of Gastrodia elata36.980
SRR5643658five period of Gastrodia elata43.680
SRR5643659five period of Gastrodia elata26.640
SRR5643660five period of Gastrodia elata24.980
SRR5643661five period of Gastrodia elata25.090
SRR5643662five period of Gastrodia elata26.810
SRR5643663five period of Gastrodia elata23.810
SRR5643664five period of Gastrodia elata25.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.700
SRR6049655Rhizomagastrodiae_C368-T10_good_124.220
SRR6049656Rhizomagastrodiae_C368-T07_good_129.650
SRR6049657Rhizomagastrodiae_C368-T07_good_123.290
SRR6049658Rhizomagastrodiae_C368-T04_good_126.120
SRR6049659Rhizomagastrodiae_C368-T04_good_125.340
SRR6049660Rhizomagastrodiae_C368-T01_good_128.040
SRR6049661Rhizomagastrodiae_C368-T04_good_123.700
SRR6049662Rhizomagastrodiae_C368-T01_good_130.640
SRR6049663Rhizomagastrodiae_C368-T01_good_131.010
SRR6049664Rhizomagastrodiae_C368-T10_good_136.630
SRR6049665Rhizomagastrodiae_C368-T10_good_136.630
SRP279888GastroGastrodia elata tuber 20.93
JuvenJuvenile tuber33.77
Mother_GastroMother tuber of Gastrodia elata 18.09
Mother_JuvenMother tuber of Juvenile 22.12