Detail information of GWHGAAEX013322/evm.TU.scaffold_5.271


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186681873|ref|YP_001865069.1|3.00E-13hypothetical protein Npun_F1419 [Nostoc punctiforme PCC 73102]
KOGKOG02941.00E-121WD40 repeat-containing protein
nrgi|743793034|ref|XP_010923824.1|2.13E-161PREDICTED: p21-activated protein kinase-interacting protein 1-like [Elaeis guineensis]
trEMBLtr|M0STR5|M0STR5_MUSAM3.00E-144Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P31530_001}
TAIRAT1G650301.00E-121Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001658743125884302+
Transcript Sequence

Network for GWHGAAEX013322

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.31WD4033680.0044
PF00400.31WD402752900.078
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.930
SRR2545915Juvenile tuber16.930
SRP108465SRR5643513five period of Gastrodia elata33.420
SRR5643514five period of Gastrodia elata35.730
SRR5643515five period of Gastrodia elata33.250
SRR5643524five period of Gastrodia elata34.150
SRR5643525five period of Gastrodia elata23.270
SRR5643528five period of Gastrodia elata28.330
SRR5643658five period of Gastrodia elata18.010
SRR5643659five period of Gastrodia elata40.470
SRR5643660five period of Gastrodia elata39.140
SRR5643661five period of Gastrodia elata41.840
SRR5643662five period of Gastrodia elata39.950
SRR5643663five period of Gastrodia elata31.360
SRR5643664five period of Gastrodia elata34.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.250
SRR6049655Rhizomagastrodiae_C368-T10_good_139.730
SRR6049656Rhizomagastrodiae_C368-T07_good_136.370
SRR6049657Rhizomagastrodiae_C368-T07_good_129.230
SRR6049658Rhizomagastrodiae_C368-T04_good_127.970
SRR6049659Rhizomagastrodiae_C368-T04_good_124.170
SRR6049660Rhizomagastrodiae_C368-T01_good_133.880
SRR6049661Rhizomagastrodiae_C368-T04_good_131.610
SRR6049662Rhizomagastrodiae_C368-T01_good_137.980
SRR6049663Rhizomagastrodiae_C368-T01_good_136.950
SRR6049664Rhizomagastrodiae_C368-T10_good_143.330
SRR6049665Rhizomagastrodiae_C368-T10_good_143.330
SRP279888GastroGastrodia elata tuber 42.09
JuvenJuvenile tuber46.35
Mother_GastroMother tuber of Gastrodia elata 21.54
Mother_JuvenMother tuber of Juvenile 25.68