Detail information of GWHGAAEX013329/evm.TU.scaffold_5.281


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17925.00E-89Reticulon
nrgi|720098299|ref|XP_010247587.1|2.94E-106PREDICTED: reticulon-like protein B8 [Nelumbo nucifera]
Swissprottr|Q9SS37|RTNLH_ARATH1.00E-89Reticulon-like protein B8
trEMBLtr|M0T454|M0T454_MUSAM5.00E-104Reticulon-like protein {ECO:0000256|RuleBase:RU210713}
TAIRAT3G102605.00E-89Reticulon family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001664268996445959-
Transcript Sequence

Network for GWHGAAEX013329

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02453.16Reticulon942473.50E-45
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms45.430
SRR2545915Juvenile tuber52.810
SRP108465SRR5643513five period of Gastrodia elata43.250
SRR5643514five period of Gastrodia elata60.510
SRR5643515five period of Gastrodia elata49.580
SRR5643524five period of Gastrodia elata59.300
SRR5643525five period of Gastrodia elata53.500
SRR5643528five period of Gastrodia elata52.750
SRR5643658five period of Gastrodia elata60.530
SRR5643659five period of Gastrodia elata41.250
SRR5643660five period of Gastrodia elata39.130
SRR5643661five period of Gastrodia elata39.790
SRR5643662five period of Gastrodia elata28.720
SRR5643663five period of Gastrodia elata38.230
SRR5643664five period of Gastrodia elata31.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_152.800
SRR6049655Rhizomagastrodiae_C368-T10_good_129.600
SRR6049656Rhizomagastrodiae_C368-T07_good_147.010
SRR6049657Rhizomagastrodiae_C368-T07_good_148.630
SRR6049658Rhizomagastrodiae_C368-T04_good_148.540
SRR6049659Rhizomagastrodiae_C368-T04_good_164.170
SRR6049660Rhizomagastrodiae_C368-T01_good_145.730
SRR6049661Rhizomagastrodiae_C368-T04_good_147.650
SRR6049662Rhizomagastrodiae_C368-T01_good_155.570
SRR6049663Rhizomagastrodiae_C368-T01_good_155.930
SRR6049664Rhizomagastrodiae_C368-T10_good_160.870
SRR6049665Rhizomagastrodiae_C368-T10_good_160.870
SRP279888GastroGastrodia elata tuber 23.95
JuvenJuvenile tuber39.01
Mother_GastroMother tuber of Gastrodia elata 29.38
Mother_JuvenMother tuber of Juvenile 25.59